VIMSS10105476 has 187 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-53 167.3 5.2 1.3e-53 167.0 5.2 1.1 1 VIMSS10105476
Domain annotation for each sequence (and alignments):
>> VIMSS10105476
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 167.0 5.2 1.3e-53 1.3e-53 2 151 .] 23 171 .. 22 171 .. 0.97
Alignments for each domain:
== domain 1 score: 167.0 bits; conditional E-value: 1.3e-53
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDq 95
r+++++e++LR++a++ ++ +a++m+t+++t+++f +i+++a+++dlpa++++vvana++++Y +l+l l++v++v+ +++++ ++ll+ilD+
VIMSS10105476 23 RRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFtqFIRFQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVK---RKTQNTRILLIILDV 115
67899***********************************************************************99...777789********* PP
CASP_dom 96 vlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
+++ ll+s+as+aaa+vyla++gn++++W +iC+qf++Fc+r++++++ sf+a++l
VIMSS10105476 116 AMLGLLTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVL 171
*****************************************************986 PP
Or compare VIMSS10105476 to CDD or PaperBLAST