XP_004233676.1 has 182 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-49 154.0 7.4 1.5e-49 153.8 7.4 1.1 1 XP_004233676.1
Domain annotation for each sequence (and alignments):
>> XP_004233676.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 153.8 7.4 1.5e-49 1.5e-49 2 150 .. 19 166 .. 18 167 .. 0.97
Alignments for each domain:
== domain 1 score: 153.8 bits; conditional E-value: 1.5e-49
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilD 94
r+++ +++++R++a++ +l +a+ m+t+++t++ f +i++ka+++dlp+f+++vvan+i+++Y +++lvls+ ++v+ + ++ +++l+++D
XP_004233676.1 19 RGISFLDFIMRIVAILGTLGSAIAMGTTNETLPSFeqFIRFKAEYKDLPTFTFFVVANGIVSAYLAVSLVLSILHIVM---SGARITRVVLIFFD 110
677889***********************************************************************9...999999******** PP
CASP_dom 95 qvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
+v+++ l+s+asAaaa+vyla+kgn +a+W +iC+ +++Fc+r++++++ sf+++l
XP_004233676.1 111 TVMMAFLTSGASAAAAIVYLAHKGNARANWIAICQHYNSFCDRASGSLVGSFIGVL 166
*****************************************************987 PP
Or compare XP_004233676.1 to CDD or PaperBLAST