XP_021848329.1 has 190 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-37 113.7 9.1 4.2e-37 113.4 9.1 1.1 1 XP_021848329.1
Domain annotation for each sequence (and alignments):
>> XP_021848329.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 113.4 9.1 4.2e-37 4.2e-37 5 150 .. 4 154 .. 1 155 [. 0.95
Alignments for each domain:
== domain 1 score: 113.4 bits; conditional E-value: 4.2e-37
CASP_dom 5 rlaelvLRllalvlalaaavvmatnkqtkevf.kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkk....serskalalllfilD 94
++e +LRl+al++ l+aa+vm+t++qtk++f +++++a+++ + +++ v++ i a+Y+llqlv+++ +++ + s +s+ l ++ f lD
XP_021848329.1 4 IKIEAILRLCALLTLLLAAIVMMTDNQTKTFFgYYKMRADYKLAKILKVSVYVYLIGAGYTLLQLVRCMAFMTKYEgdklSCSSHILKWFYFSLD 98
6799*****************************9*********************************9976666559999888999********* PP
CASP_dom 95 qvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
qv ay++++ ++A+++++ l+ +g +++qW+k+C+++ +Fc ++ +++a+ +a++
XP_021848329.1 99 QVAAYVVFAIVCATLEISFLVLTGSKDLQWMKLCSKYVRFCVQIGGSIACGGVASI 154
**************************************************999887 PP
Or compare XP_021848329.1 to CDD or PaperBLAST