NP_001142280.1 has 529 amino acids
Query: DUF563 [M=209]
Accession: PF04577.14
Description: Protein of unknown function (DUF563)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-16 45.5 0.0 8.6e-16 44.8 0.0 1.4 1 NP_001142280.1
Domain annotation for each sequence (and alignments):
>> NP_001142280.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 44.8 0.0 8.6e-16 8.6e-16 87 177 .. 314 423 .. 223 455 .. 0.65
Alignments for each domain:
== domain 1 score: 44.8 bits; conditional E-value: 8.6e-16
DUF563 87 klrdrlrerlnlekr...................kkptrvlyisRlkagsRrilNeeevlkllpkrgfe..vvdpe.slsfeeqiklfssakviv 159
++++l ++++ ++r ++p r+ ++sR +g R i+N+++v++l + gf+ +++ + l++ + + ++++v
NP_001142280.1 314 DFHQMLADAYEKPPRetarpaqqqdlrdaeqrrrRRP-RLGIVSR--KGTRVIENQAAVARLASSVGFDvdILETAnGLPLSAWYASLRACDALV 405
6666666666666666666666666666676676888.*******..9************88888887655999666****************** PP
DUF563 160 gphGsgltnliFmppgtt 177
g+hG+ lt+ +F++pg +
NP_001142280.1 406 GVHGADLTKFLFLRPGRA 423
***************844 PP
Or compare NP_001142280.1 to CDD or PaperBLAST