NP_001151219.1 has 455 amino acids
Query: DUF563 [M=209]
Accession: PF04577.14
Description: Protein of unknown function (DUF563)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.9e-25 74.0 0.1 1.5e-24 73.4 0.1 1.2 1 NP_001151219.1
Domain annotation for each sequence (and alignments):
>> NP_001151219.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 73.4 0.1 1.5e-24 1.5e-24 4 183 .. 169 364 .. 166 381 .. 0.75
Alignments for each domain:
== domain 1 score: 73.4 bits; conditional E-value: 1.5e-24
DUF563 4 gHwlvdvlprl.llleqlvlddddrilvpalaspqpfqrell.kllgi.rpekrikveldepvhve.......klivpvpprssggfqgallpkl 88
+H dvl +l + +++l+ + ++ ++ +++ ++ ++ + ++ + i+v d++vh+ +++ ++ ++s+++ g +
NP_001151219.1 169 YHDYADVLVPLfASTNHLGGEVQFLLADI-----KDWWADKFrPVFRQlSRYDVIDVNNDREVHCFprtiigsTFHRAMGIDPSRSPGGVTVADF 258
47777776666577777777777444433.....3333333334444448899999999999999985444443333333335555555555589 PP
DUF563 89 rdrlrerlnlekr...........kkptrvlyisRlkagsRrilNeeevl..kllpkrgfevvdpe.slsfeeqiklfssakvivgphGsgltnl 169
++lr+++ le+ ++p r+l+isR ++sRr++Ne +++ ++ +++ +++ +p+ + ++ ++l++sa+v++g+hG+gltn+
NP_001151219.1 259 KRLLRRAFRLERAvasrsgaprrrDRP-RLLIISR--KSSRRFVNERAMAraAAAARFDVRIAEPDnHTDMPNFARLVNSADVMMGVHGAGLTNM 350
999999999999999889888877777.*******..99**********9878888*********96777************************* PP
DUF563 170 iFmppgttvielvp 183
+F+p++++++ +vp
NP_001151219.1 351 VFLPSRAVLVQVVP 364
***99888888765 PP
Or compare NP_001151219.1 to CDD or PaperBLAST