NP_187643.1 has 494 amino acids
Query: DUF563 [M=209]
Accession: PF04577.14
Description: Protein of unknown function (DUF563)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.2e-23 68.1 0.0 1.1e-22 67.3 0.0 1.4 1 NP_187643.1
Domain annotation for each sequence (and alignments):
>> NP_187643.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 67.3 0.0 1.1e-22 1.1e-22 3 204 .. 199 429 .. 197 431 .. 0.67
Alignments for each domain:
== domain 1 score: 67.3 bits; conditional E-value: 1.1e-22
DUF563 3 ygHwlvdvlprlllleqlvlddddrilvpalaspqpfqrell.kllgi.rpekrikveld.epvhveklivpvpprssggfqgallp........... 86
+H + d l +l+++++ ++++ ++v a +++ + + ++l + + + i+ +d ++++++++iv ++ +++ +
NP_187643.1 199 LYHEFNDGLIPLYITSKRFNKKV--VFVIA--EYHKWWEMKYgDVLSQlSDYSLIDFNKDkRTHCFKEAIVGLRIHGELTVDPSQMQddgttinefrn 292
45888888888888888888888..33333..455555533345555547777777776634455555555555553333333333355555565555 PP
DUF563 87 ...................klrdrlrerlnlekrkkptrvlyisRlkagsRrilNeeevlkllpkrgfe..vvdpe.slsfeeqiklfssakvivgph 162
++++rl +r + k+p ++ +sR +gsR i+Ne+ ++k +++gf+ v++p+ + +++ ++ +s+kv+vg+h
NP_187643.1 293 vldrayrprinrldrleeqRFHARLAQRRKA---KRP-KLALFSR--TGSRGITNEDLMVKMAQRIGFDieVLRPDrTTELAKIYRVLNSSKVMVGVH 384
4444444444445444444444444444444...558.999****..*****************9998766888998999****************** PP
DUF563 163 GsgltnliFmppgttvielvppnrldns....fenlaallglkyay 204
G+++t+ +Fm+pg+ i ++p + d+ + + a+ lgl+y +
NP_187643.1 385 GAAMTHFLFMKPGSIFIQIIPLG-TDWAaetyYGEPAKKLGLDYNG 429
*******************6654.4443466688888888888866 PP
Or compare NP_187643.1 to CDD or PaperBLAST