NP_705768.4 has 580 amino acids
Query: DUF563 [M=209]
Accession: PF04577.14
Description: Protein of unknown function (DUF563)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-26 80.2 0.1 2.3e-26 79.4 0.1 1.4 1 NP_705768.4
Domain annotation for each sequence (and alignments):
>> NP_705768.4
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 79.4 0.1 2.3e-26 2.3e-26 3 205 .. 164 391 .. 162 395 .. 0.75
Alignments for each domain:
== domain 1 score: 79.4 bits; conditional E-value: 2.3e-26
DUF563 3 ygHwlvdvlprl.llleqlvlddd..drilvpalaspqpfqrellkllgirpekrikveldepvhveklivpvpprssggfqgallp........... 86
H ++d l +l ++l+q+ + +++ + +l+kll ++ + ++ ++ +l++ ++ + + + + +++
NP_705768.4 164 LMHVFHDDLLPLfYTLRQFPGLAQeaRLFFMEG--WGEGAHFDLYKLLSP-KQPLL---RAQLKTLGRLLCFSHAFVGLSKVTTWYQygfvqpqgpka 255
568888886666688888888888432222444..444444466677666.55555...335566667777777776666666666666666677789 PP
DUF563 87 ..........klrdrlrerlnlekrkkp...trvlyisRlkagsRrilNeeevl.kllpkrgfe..vvdpeslsfeeqiklfssakvivgphGsgltn 168
++++++ erln+++ p + +l++sR +++R ilNe+e+l +l +++ + +v++e+++f++ ++l+s+a+++v++hG++l+
NP_705768.4 256 nilvsgneirQFTRFMTERLNVSHAGAPlgeEYILVFSR--TQNRLILNEAELLlELAQEFQMKtvTVSLEDHTFADVVRLVSNASMLVSMHGAQLVT 351
9999999999**************955677789******..9***********9755555655533677***************************** PP
DUF563 169 liFmppgttvielvppnrldns....fenlaallglkyayv 205
++F+p+g+tv+el +p +++ + +la l g++ yv
NP_705768.4 352 ALFLPRGATVVEL-FPYAVNPDhytpYKTLATLPGMDLQYV 391
*************.565555545788899998877776665 PP
Or compare NP_705768.4 to CDD or PaperBLAST