PaperBLAST – Find papers about a protein or its homologs

 

Align Q8NAT1 to PF04577 (DUF563)

Q8NAT1 has 580 amino acids

Query:       DUF563  [M=209]
Accession:   PF04577.14
Description: Protein of unknown function (DUF563)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-27   80.5   0.1    1.9e-26   79.6   0.1    1.4  1  Q8NAT1    


Domain annotation for each sequence (and alignments):
>> Q8NAT1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.1   1.9e-26   1.9e-26       4     205 ..     165     391 ..     162     395 .. 0.69

  Alignments for each domain:
  == domain 1  score: 79.6 bits;  conditional E-value: 1.9e-26
  DUF563   4 gHwlvdvlprl.llleqlvlddd..drilvpalaspqpfqrellkllgirpekrikveldepvhveklivpvpprssggfqgallp................. 86 
              H ++d l +l ++l+q+    +    +++      +    +l+kll   ++  +    ++  ++ +l++ ++ + + +    +++                 
  Q8NAT1 165 MHVFHDDLLPLfYTLRQFPGLAHeaRLFFMEG--WGEGAHFDLYKLLSP-KQPLL---RAQLKTLGRLLCFSHAFVGLSKITTWYQygfvqpqgpkanilvsg 261
             57777776666588888877777432222333..444444466666666.44444...223344445555555553333333333333333344457788888 PP

  DUF563  87 ....klrdrlrerlnlekrkkp...trvlyisRlkagsRrilNeeevl.kllpkrgfe..vvdpeslsfeeqiklfssakvivgphGsgltnliFmppgttvi 179
                 ++++++ e+ln++++  p   + +l++sR  +++R ilNe+e+l +l +++  +  +v++e+++f++ ++l+s+a+++v++hG++l+ ++F+p+g+tv+
  Q8NAT1 262 neirQFARFMTEKLNVSHTGVPlgeEYILVFSR--TQNRLILNEAELLlALAQEFQMKtvTVSLEDHTFADVVRLVSNASMLVSMHGAQLVTTLFLPRGATVV 362
             8899**************966677789******..9***********9755555554433677**************************************** PP

  DUF563 180 elvppnrldns....fenlaallglkyayv 205
             el +p  +++     + +la+l g++  yv
  Q8NAT1 363 EL-FPYAVNPDhytpYKTLAMLPGMDLQYV 391
             **.565555545788999999888777665 PP



Or compare Q8NAT1 to CDD or PaperBLAST