VIMSS219114 has 372 amino acids
Query: DUF563 [M=209]
Accession: PF04577.14
Description: Protein of unknown function (DUF563)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-24 73.3 0.0 2.2e-24 72.9 0.0 1.1 1 VIMSS219114
Domain annotation for each sequence (and alignments):
>> VIMSS219114
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 72.9 0.0 2.2e-24 2.2e-24 2 206 .. 154 348 .. 153 351 .. 0.88
Alignments for each domain:
== domain 1 score: 72.9 bits; conditional E-value: 2.2e-24
DUF563 2 nygHwlvdvlprl.llleqlvlddddrilvpalaspqpfqrell.kllgirpekrikveldepvhveklivpvpprssggfqgallpklrdrlrerln 97
+g wl++ +p++ l+ ++ ++ ++ p+ ++p q+ + + l++ ++ r+ ++ ++++l++ + ++++++a ++++ d+l+++++
VIMSS219114 154 WFGTWLMEDCPTYaLACNEGIPVTT----APSARYPLFTQAPAYeDWLDM-KPLRL-----RSAFFRELVLFDDQS-NNRSRHARYRAMGDKLLSHVT 240
599**********888888888888....677444443333333344688.89999.....899****99999999.6667777789*********** PP
DUF563 98 lekrkkptrvlyisR.lkagsRrilNeeevlkllp.krgfevvdpeslsfeeqiklfssakvivgphGsgltnliFm.ppgttvielvppnrldnsfe 192
++ p v ++ R ++ R + Ne e++++l+ rgf++v+p + ++ ++ + akv++g+ Gs+l++ + + g +++ l+ppnr+ ++
VIMSS219114 241 HTQ--HP-GV-FLLRgGDGDLRLLRNELELAEHLRtTRGFRIVNPLKSDVPSIVAACAGAKVVIGVEGSQLVHGVNVlQAGGCLLTLQPPNRFVSYYK 334
***..89.77.****88888*********************************************************9******************** PP
DUF563 193 nlaallglkyayvl 206
+l++ +++ ++v+
VIMSS219114 335 YLTDRDHQHFGFVV 348
****9999998886 PP
Or compare VIMSS219114 to CDD or PaperBLAST