PaperBLAST – Find papers about a protein or its homologs

 

Align W5PKW4 to PF04577 (Glyco_transf_61)

W5PKW4 has 529 amino acids

Query:       Glyco_transf_61  [M=136]
Accession:   PF04577.18
Description: Glycosyltransferase 61
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-19   57.0   0.0    2.8e-19   56.0   0.0    1.6  1  W5PKW4    


Domain annotation for each sequence (and alignments):
>> W5PKW4  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   2.8e-19   2.8e-19      34     135 ..     339     444 ..     248     445 .. 0.74

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 2.8e-19
  Glyco_transf_61  34 lvglglaklrkllrakfnlskikp....tryvyisRkksgkRrilNeeellealkkefggikfeivdpekl..sleeqvklfssakvivgphGS 121
                       +++ ++++++++ +++n+++  p     r+ ++ R ++++R+ilN +el++alk+   +++++ivd +     + +q ++ +++++++g+hG+
           W5PKW4 339 QNTGLFRAFSQHVLHRLNITQEGPkggkIRVTILAR-STEYRKILNQNELVNALKTV-STFEVQIVDYKYKelGFLDQLRITHNTDIFIGMHGA 430
                      34455566666666666666666677779*******.9******************9.678888887765545********************* PP

  Glyco_transf_61 122 altnlifmppgtvv 135
                      +lt+l+f+p+ + v
           W5PKW4 431 GLTHLLFLPDWAAV 444
                      ********998776 PP



Or compare W5PKW4 to CDD or PaperBLAST