PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10103770 to PF04765 (TOD1_MUCI70)

VIMSS10103770 has 499 amino acids

Query:       TOD1_MUCI70  [M=314]
Accession:   PF04765.17
Description: TOD1/MUCI70, glycosyltransferase-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     1e-133  431.5   0.0   1.2e-133  431.2   0.0    1.1  1  VIMSS10103770  


Domain annotation for each sequence (and alignments):
>> VIMSS10103770  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  431.2   0.0  1.2e-133  1.2e-133       1     314 []     139     443 ..     139     443 .. 0.98

  Alignments for each domain:
  == domain 1  score: 431.2 bits;  conditional E-value: 1.2e-133
    TOD1_MUCI70   1 leyieeeekskeesskeseFgGkqsleeReesfkikesmkvhCGFvkgkkpsektGfdisekdkeelekckvvvasaiFgnsDklrqPkniseask 96 
                    l+y++e+e+sk   s+ + FgG+ s++eReesfk+k +mkvhCGF+      +++G+++s+ dke+++kc++vva++iF+++D+ +qP+nis++s 
  VIMSS10103770 139 LTYVTEDESSK---SQFPLFGGNISWSEREESFKLKPEMKVHCGFM------PRGGAEMSSLDKEYVKKCRFVVATGIFDAYDEPHQPSNISKRSM 225
                    78999998776...678****************************5......88****************************************** PP

    TOD1_MUCI70  97 knvcfvmfvDeetlkalkkegkvldes...kkvGlWrivvvknlpykdarrnGkvpklllhRlfpnarysiWiDsklqlvvdPllilerflwrkns 189
                    + +cf+m+vDe++l+ l+k+++v ++     +vG+Wr++++k+ py+++rrnGkvpk+l+hRlfp+a+ysiWiD+k++l+vdPlliler+lwr ++
  VIMSS10103770 226 NLFCFLMVVDEVSLDFLRKNTTVRKDVeggIWVGIWRLILLKTPPYDEPRRNGKVPKILTHRLFPEAQYSIWIDGKMELIVDPLLILERYLWRGKH 321
                    **********************999887778***************************************************************** PP

    TOD1_MUCI70 190 efaiskhykrvsvfeeaeankrakkydkesideqlefYkkeGlkkfsesklpitsdvpegsvivrehtplsnLfsClwfnevdrftsRDqlsFayv 285
                    +fai++h+++++++eea+a+kr+k+y++  +d ++++Y+ eGl+++s +k +++sdvpeg+vi+reht+++nLfsClwfnev+ +t+RDqlsF+yv
  VIMSS10103770 322 TFAIAQHKHHRNIYEEADACKRRKRYARPLVDLHMKIYRYEGLEPWSIKK-NTVSDVPEGAVIIREHTAMNNLFSCLWFNEVHLLTPRDQLSFGYV 416
                    **************************************************.99******************************************* PP

    TOD1_MUCI70 286 rdklkakkklklnmFkdcerrklvklvrh 314
                    +d+lk   ++k++mF++ce+++l++l+ h
  VIMSS10103770 417 VDRLK--GAFKVFMFQNCEYNSLFELHPH 443
                    *****..9****************99988 PP



Or compare VIMSS10103770 to CDD or PaperBLAST