PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10083429 to PF04783 (DUF630)

VIMSS10083429 has 798 amino acids

Query:       DUF630  [M=59]
Accession:   PF04783.16
Description: Protein of unknown function (DUF630)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-29   87.0   2.2    3.8e-29   87.0   2.2    1.9  2  VIMSS10083429  


Domain annotation for each sequence (and alignments):
>> VIMSS10083429  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.0   2.2   3.8e-29   3.8e-29       1      59 []       1      59 [.       1      59 [. 0.98
   2 ?   -3.4   0.1      0.66      0.66      25      42 ..     477     494 ..     464     505 .. 0.65

  Alignments for each domain:
  == domain 1  score: 87.0 bits;  conditional E-value: 3.8e-29
         DUF630  1 MGcaaSklddeeavalCreRkrllkqaveaRyaLAaaHvaYlqSLrnvgaaLrrFaeee 59
                   MGca+Sk+++eeav +C+eRk+l+k+av aR+a+AaaH aY+ +L+n+gaaL+++ ++e
  VIMSS10083429  1 MGCAQSKIENEEAVTRCKERKQLMKDAVTARNAFAAAHSAYAMALKNTGAALSDYSHGE 59
                   *******************************************************9876 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.66
         DUF630  25 kqaveaRyaLAaaHvaYl 42 
                    + + +a+ a +  H+ Y+
  VIMSS10083429 477 DSLERAKAAVSHLHTRYI 494
                    555566667777788886 PP



Or compare VIMSS10083429 to CDD or PaperBLAST