PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS3458089 to PF05057 (DUF676)

VIMSS3458089 has 416 amino acids

Query:       DUF676  [M=217]
Accession:   PF05057.18
Description: Putative serine esterase (DUF676)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-11   30.6   0.1    2.6e-10   26.3   0.1    2.3  1  VIMSS3458089  


Domain annotation for each sequence (and alignments):
>> VIMSS3458089  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.1   2.6e-10   2.6e-10       2     129 ..      11     155 ..      10     164 .. 0.59

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 2.6e-10
        DUF676   2 skkdhLvVlvHGlegnsadl............eyvkeqlekkeklpdelivvlmsennesktfkgidv..lgerlaeevlevvkkkkdk........ 76 
                   ++k+ L++++HG+ + s+ +                     +e++ +e++ ++ +  n++ +  +++    +  l+  +     + +++        
  VIMSS3458089  11 NNKENLIIFIHGFTSDSETWtnsskykfpemlS--------EEDFINENFDIAYF--NYFTKLIDFKKarFTSGLIRTIFAKPSNIAKNisikslse 97 
                   68899***********99997555444444440........44555554444433..2333333333322233333333322222222233334445 PP

        DUF676  77 ............ikkiSfvghSlGgliaryaigklkekkmtlkglikglepvtFitlasPhLGvl 129
                               +k i +++hS+Ggli+++ i    ++++         ++  F++la Ph G+ 
  VIMSS3458089  98 hlkssieiyceeYKNIILIAHSMGGLISKAFILDDLNENE-------STKVKLFLSLAVPHKGSN 155
                   55555666666677788***********998885443332.......347899********9976 PP



Or compare VIMSS3458089 to CDD or PaperBLAST