PaperBLAST – Find papers about a protein or its homologs

 

Align XP_001347839.2 to PF05057 (DUF676)

XP_001347839.2 has 1201 amino acids

Query:       DUF676  [M=217]
Accession:   PF05057.18
Description: Putative serine esterase (DUF676)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.6e-15   41.5   4.5    5.8e-12   31.6   1.8    2.9  2  XP_001347839.2  


Domain annotation for each sequence (and alignments):
>> XP_001347839.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   3.5e-05   3.5e-05      43      76 ..     748     782 ..     721     789 .. 0.85
   2 !   31.6   1.8   5.8e-12   5.8e-12     138     215 ..     793     867 ..     782     869 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 3.5e-05
          DUF676  43 msennesktfkgidv.lgerlaeevlevvkkkkdk 76 
                      +++++s+++kg++v l+er+++e++e++k++ d+
  XP_001347839.2 748 EKNGIDSFKGKGLHVsLRERIIIEIMESAKNGIDG 782
                     578999************************99887 PP

  == domain 2  score: 31.6 bits;  conditional E-value: 5.8e-12
          DUF676 138 glalleklkk.slsmkqlgktGreLflkdekdkkkslllkllkdesdlkliealkaFkrrvlyanvvndrivplksess 215
                     g  ++e+l+k  ++mk+l+k+ ++L++ +++dk+ s+++k+l+++s   ++e++k+++++ + ++++n++++++k+++ 
  XP_001347839.2 793 GKLFMEALEKlNINMKDLKKD-KNLISLEVYDKILSTMFKILTEMS---FYEDSKFYETLGIKKDILNQSLKDIKIKML 867
                     55566666552359*******.***********************9...*************************99876 PP



Or compare XP_001347839.2 to CDD or PaperBLAST