PaperBLAST – Find papers about a protein or its homologs

 

Align P33842 to PF05077 (DUF678)

P33842 has 76 amino acids

Query:       DUF678  [M=74]
Accession:   PF05077.16
Description: Protein of unknown function (DUF678)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-37  111.7   6.5    8.2e-37  111.6   6.5    1.0  1  P33842    


Domain annotation for each sequence (and alignments):
>> P33842  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.6   6.5   8.2e-37   8.2e-37       2      74 .]       2      75 ..       1      75 [. 0.93

  Alignments for each domain:
  == domain 1  score: 111.6 bits;  conditional E-value: 8.2e-37
  DUF678  2 dst...agakkrrkrkpkttvededdcvtCSsCqSkLvkvsdvskvslselkvagkgntlsCaACgSeLrlLrdla 74
            dst   +g+k+ rk+kpkttv deddc+tCS+CqSkLvk+sd++kvsl++++++ +gntl+C ACgS+L+lL+d+a
  P33842  2 DSTnarSGMKS-RKKKPKTTVIDEDDCMTCSVCQSKLVKISDITKVSLDYINTM-RGNTLACTACGSSLKLLNDFA 75
            55544488998.999***************************************.********************7 PP



Or compare P33842 to CDD or PaperBLAST