NP_001144876.2 has 205 amino acids
Query: DUF679 [M=163]
Accession: PF05078.16
Description: Protein of unknown function (DUF679)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.4e-66 206.9 1.8 1.1e-65 206.7 1.8 1.0 1 NP_001144876.2
Domain annotation for each sequence (and alignments):
>> NP_001144876.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 206.7 1.8 1.1e-65 1.1e-65 2 163 .] 41 202 .. 40 202 .. 0.99
Alignments for each domain:
== domain 1 score: 206.7 bits; conditional E-value: 1.1e-65
DUF679 2 stanLaklLPtgtvlaFqlLspvltnkGeCekvnklltaaLlalcalscfllsfTDsfkgedgkvyyglatlkglwvfdaekekekeelskyrlr 96
+t++La++LPtgt+l+F++L p +G+C++v+ ++ aLlalca+scfl++fTDsf++ dgkvyyg++t++gl +f++ +e ++++yrl
NP_001144876.2 41 KTSMLANFLPTGTLLTFEMLLPAAAGDGTCSAVSAAMLRALLALCAASCFLFHFTDSFRAPDGKVYYGFVTPRGLSLFRTGLGVEVPREERYRLA 135
799******************************************************************************************** PP
DUF679 97 flDfvhAvlsvlvFlavalldknvvkCffpkaeeetkellkalPlvvgvlasllfvvfPtkRhgiGy 163
f+D+vhAv+svlvF+av+l d +v C++ +++e++e+++++Pl+vg+++s lf++fP++R giG+
NP_001144876.2 136 FVDVVHAVMSVLVFAAVTLADYRVSGCLVAGHRKEMDEVMESFPLMVGAVCSGLFLLFPNTRYGIGC 202
******************************************************************7 PP
Or compare NP_001144876.2 to CDD or PaperBLAST