PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::7fc0E to PF05114 (DUF692)

biolip::7fc0E has 264 amino acids

Query:       DUF692  [M=263]
Accession:   PF05114.17
Description: Protein of unknown function (DUF692)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-27   81.8   0.0    3.1e-27   81.5   0.0    1.0  1  biolip::7fc0E  


Domain annotation for each sequence (and alignments):
>> biolip::7fc0E  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.5   0.0   3.1e-27   3.1e-27      11     246 ..      16     246 ..       7     261 .. 0.84

  Alignments for each domain:
  == domain 1  score: 81.5 bits;  conditional E-value: 3.1e-27
         DUF692  11 leelleekpevdflEvaaenylkaggkakkqleklreryplvlHGv.slslGsaepldeehlkrlkallerlepalvSeHlawssaegvelndLlP 105
                    +++l+ ++ ++d++E+  +n+++    + ++l++   ++p+ +H + s  + s e+  +++ +rl+ ++e+l+p +vS+H+a+ s++g+ l++L  
  biolip::7fc0E  16 VRQLA-QEGAIDYCELLIDNFMQ---VPPQELAEA-FDVPVGFHIMfSRFIESDEEQLRDFAARLRPYIEALRPLYVSDHIAYFSHQGRALYHLGE 106
                    56666.7888************5...445555543.5899****7527779********************************************* PP

         DUF692 106 lpyteealevvaerieqvqdilerplllEnvssylafkeselsEleFlaevvertgcglllDvnNvyvnavNhgfdpeayldalplervaeiHlAG 201
                    + y  +  e+v +r +  q+ l++++  En  s ++         +F++++++ tg+g+l+Dv N  +  +N g +++a+   +     +++H+ G
  biolip::7fc0E 107 IDYAAD-YERVRARAALWQSLLGQTIHFENYPSIVDG---GHAAPAFFQRLARDTGAGVLFDVSNAVCAWRNDGPEVAAWRGVMAG--ASHFHVGG 196
                    ***876.699********************9998655...456689****************************999998766654..5799**99 PP

         DUF692 202 h...eekeelliDtHgapvadevwelleealarlgpv..ptllErDenip 246
                    +     +e++++DtH+++ a++ ++ l++  + l++    +  ErDeni 
  biolip::7fc0E 197 YagaFIDEGVTVDTHDRALAQDTLDSLRRHRDVLDKPgaTITYERDENID 246
                    965433678*******************999999887434567****994 PP



Or compare biolip::7fc0E to CDD or PaperBLAST