PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS11851 to PF05128 (DUF697)

VIMSS11851 has 453 amino acids

Query:       DUF697  [M=162]
Accession:   PF05128.16
Description: Domain of unknown function (DUF697)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-40  122.2   2.9    9.1e-40  122.2   2.9    1.7  2  VIMSS11851  


Domain annotation for each sequence (and alignments):
>> VIMSS11851  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0      0.53      0.53     141     158 ..     241     257 ..     238     260 .. 0.77
   2 !  122.2   2.9   9.1e-40   9.1e-40       2     156 ..     274     433 ..     273     438 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 0.53
      DUF697 141 wgdegkpklsevvkells 158
                 w++   pkl ++++++++
  VIMSS11851 241 WEKPA-PKLDQLRQKIFT 257
                 66666.999999999987 PP

  == domain 2  score: 122.2 bits;  conditional E-value: 9.1e-40
      DUF697   2 qaaellelaeqelleqrdreakkliekyawekAlvvavsPlalvDllavaavnlrmirelaelYgielgyesairLarsvlanlaalGavelgtdl... 97 
                 q ++ ++++++++ e+r++ea++li+ky+++kAl++av+P+ l+Dl+a ++++l +ir+la++Yg+++++ +a r++++vl  ++++ ++++++ l   
  VIMSS11851 274 QVEQAEKNIATKTIEIRTAEADQLISKYMRYKALAIAVNPIGLLDLAASVITDLLLIRNLARIYGLPITSYEAGRIWKKVLIGAGGILLSQWVSALflg 372
                 67889999****************************************************************************************777 PP

      DUF697  98 lkqllsl.....nlatklsaraaQGvvagllTarvGlsaieyfrplpswgdegkpklsevvkel 156
                 l++++sl     nla+++ ++++QG va+++T++vG  a+ y+++++swg++g    s+ + ++
  VIMSS11851 373 LQKTASLvenpgNLAAYAGGALLQGGVAAYSTYIVGEGAKIYLAQGASWGNAG---TSTAIAKI 433
                 6666666999******************************************9...77777766 PP



Or compare VIMSS11851 to CDD or PaperBLAST