PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10097793 to PF05142 (DUF702)

VIMSS10097793 has 183 amino acids

Query:       DUF702  [M=151]
Accession:   PF05142.16
Description: Domain of unknown function (DUF702)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-46  144.6  14.1      3e-45  140.6  14.1    2.0  1  VIMSS10097793  


Domain annotation for each sequence (and alignments):
>> VIMSS10097793  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.6  14.1     3e-45     3e-45       2     150 ..      38     172 ..      37     173 .. 0.76

  Alignments for each domain:
  == domain 1  score: 140.6 bits;  conditional E-value: 3e-45
         DUF702   2 gisCqdCgnqakkdCahrrCRtCCksrgfdCatHvkstwvpaakrrerqqqlaalqaqaaeaeaeaassasssekskrpreesaaasassts.att 96 
                    ++ C+dCgn+akk+C ++rCRtCCksrg++C tHvkstw+p++  r+     ++ ++++++ + ++         +  p     +   ++ts +++
  VIMSS10097793  38 EKVCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATRSS----SSPSERKKKLKIDK---------QSSPNV---SLLPTTTSrQER 117
                    578***************************************999986....22222222111111.........111221...122222222344 PP

         DUF702  97 skseslpeevsseAvFrcvrvsavddgee.evaYqtavkigGhvfkGiLydqGle 150
                       e lp +++++AvF+++rv+a++++e+ e++Yq++v+i+Gh+fkG+L+ +G++
  VIMSS10097793 118 GFREGLPGKIEAPAVFKRTRVTAISNNEQaEIGYQATVTISGHIFKGFLHYYGVD 172
                    45679*******************987766***********************98 PP



Or compare VIMSS10097793 to CDD or PaperBLAST