PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::6i4yA to PF05254 (UPF0203)

biolip::6i4yA has 429 amino acids

Query:       UPF0203  [M=69]
Accession:   PF05254.16
Description: Uncharacterised protein family (UPF0203)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-29   87.1   2.0    6.5e-29   86.3   2.0    1.4  1  biolip::6i4yA  


Domain annotation for each sequence (and alignments):
>> biolip::6i4yA  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.3   2.0   6.5e-29   6.5e-29       1      57 [.     371     427 ..     371     429 .] 0.97

  Alignments for each domain:
  == domain 1  score: 86.3 bits;  conditional E-value: 6.5e-29
        UPF0203   1 aslapeCtelKekYdkCFnkWysekflkgkskeeeCeklfkeYqeCvqkalkekgie 57 
                    +s+++ Ct++K++Yd+CFn+W++ekflkg+s+ ++C++lfk+Yq+Cvqka+kek+i 
  biolip::6i4yA 371 NSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEIP 427
                    699***************************************************996 PP



Or compare biolip::6i4yA to CDD or PaperBLAST