PaperBLAST – Find papers about a protein or its homologs

 

Align NP_611282.1 to PF05267 (DUF725)

NP_611282.1 has 213 amino acids

Query:       DUF725  [M=121]
Accession:   PF05267.16
Description: Protein of unknown function (DUF725)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      4e-39  119.6  21.0    7.3e-39  118.8  21.0    1.4  1  NP_611282.1  


Domain annotation for each sequence (and alignments):
>> NP_611282.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.8  21.0   7.3e-39   7.3e-39       2     120 ..      47     165 ..      46     166 .. 0.99

  Alignments for each domain:
  == domain 1  score: 118.8 bits;  conditional E-value: 7.3e-39
       DUF725   2 skeCfeeYlpelnevaeqyeaeytkCestaeeereeidakveeereqlessakelcsalqkCdsitdsldafeCyakagsenlkilysisanAselaa 99 
                  +++Cf+ Y+p+ln+va++++++y++C++ta+++ ++++a++e+++++++s++++lcsa+++Cds++d+ ++f+Cya+a++++++++y++++nA+++a+
  NP_611282.1  47 TTQCFNLYMPMLNQVAATFSSSYQDCITTANAQIANLTAQAEQQQKTYQSDVSTLCSAFTACDSNNDTANFFNCYANAADNDVSVIYNLASNAASSAT 144
                  78************************************************************************************************ PP

       DUF725 100 slseeysaidtteeqCtnkae 120
                  s+s+ ++ai++te+qCtn+++
  NP_611282.1 145 SFSSGIQAIQDTEYQCTNTTQ 165
                  *******************98 PP



Or compare NP_611282.1 to CDD or PaperBLAST