PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS565954 to PF05542 (DUF760)

VIMSS565954 has 112 amino acids

Query:       DUF760  [M=83]
Accession:   PF05542.15
Description: Protein of unknown function (DUF760)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      9e-36  108.5   0.9      1e-35  108.3   0.9    1.1  1  VIMSS565954  


Domain annotation for each sequence (and alignments):
>> VIMSS565954  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.3   0.9     1e-35     1e-35       1      83 []      19     101 ..      19     101 .. 0.99

  Alignments for each domain:
  == domain 1  score: 108.3 bits;  conditional E-value: 1e-35
       DUF760   1 eLlryiqslkpeevkalskpaspevleaikqtvsgllgllpsesfevtietsrekLaqLlassmmtGYfLrnaeqRleLeksl 83 
                  +L++y+q+++pe +++++k+as++++e+i+++v+gllg+lps++f+v i+ s++++a+Ll s+mmtGYfLr++eqR eLe++l
  VIMSS565954  19 DLIQYLQKQSPEVMQRVAKSASEDIQEIIRHNVQGLLGMLPSDQFDVKITSSKDNIANLLSSAMMTGYFLRQMEQRKELEQTL 101
                  699*****************************************************************************987 PP



Or compare VIMSS565954 to CDD or PaperBLAST