biolip::8ohdB has 403 amino acids
Query: CDK5RAP3 [M=502]
Accession: PF05600.16
Description: CDK5 regulatory subunit-associated protein 3
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.6e-153 497.4 22.2 7.3e-66 209.0 0.6 3.0 3 biolip::8ohdB
Domain annotation for each sequence (and alignments):
>> biolip::8ohdB
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 107.7 0.5 3.6e-35 3.6e-35 2 70 .. 5 73 .. 4 74 .. 0.97
2 ! 209.0 0.6 7.3e-66 7.3e-66 91 250 .. 74 231 .. 73 233 .. 0.98
3 ! 191.8 8.6 1.1e-60 1.1e-60 332 502 .] 231 400 .. 229 400 .. 0.99
Alignments for each domain:
== domain 1 score: 107.7 bits; conditional E-value: 3.6e-35
CDK5RAP3 2 qnlpIDIqyskLldWLvdRrhvpkdWqkqlkairekiseaiqdmpeseeilqllsgeeinYfhckkIve 70
q++pIDIq+skLldWLvdRrh++ +Wq+ + +ireki++aiqdmpeseei+qllsg++i+Yfhc++I++
biolip::8ohdB 5 QHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSGSYIHYFHCLRILD 73
789****************************************************************87 PP
== domain 2 score: 209.0 bits; conditional E-value: 7.3e-66
CDK5RAP3 91 mkdWqeivklYekdnvyLaEaAqilvrnvnYEiPslkkqiaklqqqleelerKeadlkrsaaeaaakyeeackqlgikGknvreELlelvkeLpsl 186
+kdWqei+ lYekdn+yL E++++lvrnvnYEiPslkkqiak+qq+++e++rKe++++ aae++++++++ckq+gi+G+nvr ELl+lvk+Lps
biolip::8ohdB 74 LKDWQEIIALYEKDNTYLVELSSLLVRNVNYEIPSLKKQIAKCQQLQQEYSRKEEECQAGAAEMREQFYHSCKQYGITGENVRGELLALVKDLPSQ 169
69********************************************************************************************** PP
CDK5RAP3 187 fekiaeelkseklskaieyYkafvefvhtekkesevlpllkevqekgnttvyewrtgekpskie 250
+++i +++++ +l +ai+ Y+a v fv+++ ++vlp+l++vq++gn tvyewrtg++ps ++
biolip::8ohdB 170 LAEIGAAAQQ-SLGEAIDVYQASVGFVCES-PTEQVLPMLRFVQKRGNSTVYEWRTGTEPSVVV 231
*********9.*****************99.788**************************9875 PP
== domain 3 score: 191.8 bits; conditional E-value: 1.1e-60
CDK5RAP3 332 vakgdealslledkeyRnkllddLlELeaFLkqRlvElseestsvlslsqfqsapevlqqqtkeeieemlsevesvlslltnkklqhLlliktskr 427
va+g +al+lle++e+Rn++ld+L+ELe+FL qR+vElsee+ +vls+sqfq ap +lq qtke++ +m+s e+++ +lt+ +lqhL++i++s+r
biolip::8ohdB 231 VARGPDALTLLEYTETRNQFLDELMELEIFLAQRAVELSEEA-DVLSVSQFQLAPAILQGQTKEKMVTMVSVLEDLIGKLTSLQLQHLFMILASPR 325
7899*************************************8.***************************************************** PP
CDK5RAP3 428 yvdrlvesLeqklkaeeklkeklkdleekreelrnqlselepkleklvkkTrelkkeiekdlskrykgrpVnlmG 502
yvdr++e L+qklk+ + l+ k++ + +k++e+ +++++lepkl+ l++kT+el+k+ie+d+skry+grpVnlmG
biolip::8ohdB 326 YVDRVTEFLQQKLKQSQLLALKKELMVQKQQEALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMG 400
**************************************************************************9 PP
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