PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS2060279 to PF05656 (DUF805)

VIMSS2060279 has 364 amino acids

Query:       DUF805  [M=107]
Accession:   PF05656.18
Description: Protein of unknown function (DUF805)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.9e-22   64.7   4.5    9.8e-22   63.7   4.5    1.5  1  VIMSS2060279  


Domain annotation for each sequence (and alignments):
>> VIMSS2060279  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   4.5   9.8e-22   9.8e-22       1     105 [.      12     160 ..      12     166 .. 0.76

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 9.8e-22
        DUF805   1 yfsfsGRarRkeywwfvlvlvlvlivlllllallgas..........................allgsalalllalllllpsllavtvRRlHDigrs 71 
                   y++fsGR++R++yww++l+++++++ l+++  + ++                           a++   + l++ l++l+ps +a+ vRRl+D+g  
  VIMSS2060279  12 YADFSGRSSRSDYWWAFLCHMIIIVPLFIIIWVSALGsifsvaqdaaygyepdpsaflagagfAVIFWFILLIYYLAILVPS-MAIIVRRLRDAGYH 107
                   89********************99999998887777699*****************99888877777777888888888888.************76 PP

        DUF805  72 gwwlllllip..............li...glivllvllllpgtpg..enrYGp 105
                     +l+l++ p              l+    +i+l+vll++ ++p+   n YG+
  VIMSS2060279 108 WAFLFLAIGPsiailipvlniiavLValpCFIALIVLLCQGSKPEmvGNSYGQ 160
                   55555555544444444555444411344667889999999665422455554 PP



Or compare VIMSS2060279 to CDD or PaperBLAST