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Align VIMSS1745207 to PF05728 (UPF0227)

VIMSS1745207 has 399 amino acids

Query:       UPF0227  [M=187]
Accession:   PF05728.16
Description: Uncharacterised protein family (UPF0227)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-09   24.0   0.0    5.4e-09   22.4   0.0    1.7  2  VIMSS1745207  


Domain annotation for each sequence (and alignments):
>> VIMSS1745207  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.18      0.18       5      13 ..     174     182 ..     171     186 .. 0.85
   2 !   22.4   0.0   5.4e-09   5.4e-09      42     160 ..     236     364 ..     230     393 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.18
       UPF0227   5 lHGFdSSPr 13 
                   +HGF  SP 
  VIMSS1745207 174 IHGFMGSPY 182
                   8******95 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 5.4e-09
       UPF0227  42 pqqalkeleklvae...lgdekpllvGssLGGyyatrlger.fglrqvlln.Palkpeenlagklgeqanqytgetyvleeyhiielka.....lev 128
                   ++qa++   +++ +   +g ++++l G sLGG++++ l+   + +++v+ n P ++p++++++   ++ +   + ++  +  ++ e +a     l+ 
  VIMSS1745207 236 MAQAVHDFRSVMDHlefTGVDRIALTGISLGGFTSALLASVdHRIQAVIPNvPVVTPDRTVDEWFPANMLVALERHIAHTDPELTEAAAryaspLHY 332
                   5555555555444311045667****************97549999999998**********99999988887777766655555554422222666 PP

       UPF0227 129 srlkrperilvllskqDevldyrravaeyraa 160
                   + l ++er l++ + +D   + ++a   ++++
  VIMSS1745207 333 QPLVAKERRLIITGLGDRLAPPQQAELLWEHW 364
                   67999999999999999999888887666666 PP



Or compare VIMSS1745207 to CDD or PaperBLAST