VIMSS55301 has 268 amino acids
Query: UPF0227 [M=187]
Accession: PF05728.16
Description: Uncharacterised protein family (UPF0227)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.1e-09 22.2 0.1 1.7e-08 20.8 0.0 1.8 2 VIMSS55301
Domain annotation for each sequence (and alignments):
>> VIMSS55301
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 20.8 0.0 1.7e-08 1.7e-08 21 81 .. 46 109 .. 33 182 .. 0.77
2 ? -1.2 0.0 0.094 0.094 140 186 .. 215 266 .. 198 267 .. 0.73
Alignments for each domain:
== domain 1 score: 20.8 bits; conditional E-value: 1.7e-08
UPF0227 21 lqfiaedvlaielsvlklkhdpqq...alkeleklvaelgdekpllvGssLGGyyatrlgerfg 81
q++ ++ + + + + h+ +q l+e+ +++ e+ +++ + vG sLGG++at+++ +
VIMSS55301 46 AQALSDHFRVHVVDLPGYGHSAEQhaaSLEEIAQALLEHAPRNAIWVGWSLGGLVATHMALHHS 109
4555555566666666555554441115778889999999999****************98774 PP
== domain 2 score: -1.2 bits; conditional E-value: 0.094
UPF0227 140 llskqDevldy..rravaeyraaaeiveddg.dHk..fkdfsrhlqqiiafl 186
l ++ D ++ r++++++++ e + d+ H+ +++ + qq+i+f+
VIMSS55301 215 LYGRLDGLVPAkvARDLNHLAPYSEAFMFDQsSHApfMTEAEAFCQQLIEFA 266
5566677766644678899999999877766689765677777778888775 PP
Or compare VIMSS55301 to CDD or PaperBLAST