PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS216740 to PF05787 (PhoX)

VIMSS216740 has 691 amino acids

Query:       PhoX  [M=515]
Accession:   PF05787.17
Description: Alkaline phosphatase PhoX
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   3.6e-139  451.2   2.8   4.2e-139  450.9   2.8    1.0  1  VIMSS216740  


Domain annotation for each sequence (and alignments):
>> VIMSS216740  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  450.9   2.8  4.2e-139  4.2e-139       2     515 .]      85     653 ..      84     653 .. 0.90

  Alignments for each domain:
  == domain 1  score: 450.9 bits;  conditional E-value: 4.2e-139
         PhoX   2 gfgplaadtddlldvPeGykykvlirwGdkifdgapefd....qsaeaqeeqvgsnhDgmaafple.erdttlLvvNhEytneeilf.....kekpkp 89 
                  gf+++  +++d+  v++Gy+++vl+ wG+++ ++ + ++    +++++q++ +g++hDgm++fp++ +++ +lL++N Ey++++ l+     +    +
  VIMSS216740  85 GFQSIPGSRTDACVVAAGYSAYVLAPWGTPLNSNGNPWKsdgsNTSTDQANAMGMHHDGMHFFPINgSSEDGLLAINFEYIDTAALHpagptTDVNGK 182
                  79999999************************999888889999*********************9777788***************99998666667 PP

         PhoX  90 vtaelvkkeqaagGvtvvevsrksgkwqvvrdsklnrritattemrlsGPAagsellktssdpegvkilGtlnNCagGtTpWGtyLtcEEnfdgyfgt 187
                  +  e+v+ke++a+G  vv++++ +g+wqvv +  lnrr+t ++ m+++GP +g++ +kt+ +  g+++ Gt nNC++G+TpWGtyLtcEEn+ g f +
  VIMSS216740 183 RPVEEVRKEINAHGAGVVRLQKINGRWQVVDNDPLNRRFTTASRMEITGPLRGTDHVKTKYSTAGTHCRGTNNNCGNGYTPWGTYLTCEENWPGIFVN 280
                  77899*****************************************************************************************6666 PP

         PhoX 188 ...vkkdqkryG...ettey................erFdva...........netkkfGyvvEvdpsdpestpvkltalGrfkHEavavvv.edpkr 251
                      ++dq+r+G    + +y                +rFdv+           ne+ ++Gy+vE+dp++  + ++k+talGrf+HE++a  +  + k 
  VIMSS216740 281 kgtRPEDQRRIGvgtSSGQYkwesaagdasevddefARFDVTvkgasatddyrNEASTYGYIVEIDPYNSSTLATKRTALGRFRHEGCAPGLpVAGKP 378
                  666999******9654556699******************************************************************9866156666 PP

         PhoX 252 vvvYlgdDerkellYkFvpndrlrtgns......eanssLldeGtLqvaklnedelgaveWvdlveata.......engfadqaevlvdtrlaadkvG 336
                   v+Y+gdD+++e+lYk+v+     + +       ++  + ld+G L+va++n+d  g++ W+ l+ ata        + + d   +  +tr a+d+vG
  VIMSS216740 379 LVWYMGDDSNNEYLYKWVSTAVWDPADAtpadrlATGAKYLDQGKLYVARFNAD--GTGVWLLLDVATAttagstlGALYGDLPGIILNTRGAGDAVG 474
                  9*******************999999887777677778889*************..*****999888554344333444999999************* PP

         PhoX 337 atkmdrpEgvavnPktkfaegevyvvltnngkr..skideanpraknkyGqivryipesrdaastkftldlflvaGdpedaea.asaessegndlesp 431
                  at mdrpE+  vnP ++    +vy++ltnn+ r  +k+d+anpr  n++G+i+r+ ++++   +  ft+d+f++  +   + + +  + +e n+++sp
  VIMSS216740 475 ATPMDRPEWTTVNPLNG----DVYLTLTNNSARtpDKVDAANPRGPNRHGHIIRWHDSDD---QLSFTWDIFVFGANAAGTADiNRSGLTELNQFASP 565
                  *****************....**********998899*******************8877...999*********9988887789999********** PP

         PhoX 432 DniavdpeGrlwiqeDgneskde......llgvtaeGkvynlarnqg..vltsderrgevkrfltepegsEftGvtfsPdgrtlfvnvqhPG 515
                  D++ +d++G lw  +D  e + +      ll v +   v +     g  v ++ +++  ++rf+ +p+g+E+tG+tf+Pd++tlfvn+qhP+
  VIMSS216740 566 DGMSFDSRGVLWFETDNGETTLTdytndqLLAVIPTDLVDAS----GkqVPVNAQNQVDLRRFFVGPNGCEVTGITFTPDNKTLFVNIQHPD 653
                  ****************99977654444444444444443333....2559999**************************************6 PP



Or compare VIMSS216740 to CDD or PaperBLAST