PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS341771 to PF05787 (PhoX)

VIMSS341771 has 678 amino acids

Query:       PhoX  [M=515]
Accession:   PF05787.17
Description: Alkaline phosphatase PhoX
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.8e-145  471.9   2.3   2.1e-145  471.7   2.3    1.0  1  VIMSS341771  


Domain annotation for each sequence (and alignments):
>> VIMSS341771  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  471.7   2.3  2.1e-145  2.1e-145       2     515 .]      74     641 ..      73     641 .. 0.91

  Alignments for each domain:
  == domain 1  score: 471.7 bits;  conditional E-value: 2.1e-145
         PhoX   2 gfgplaadtddlldvPeGykykvlirwGdkifdgapefd....qsaeaqeeqvgsnhDgmaafple.erdttlLvvNhEytneeilf.....kekpkp 89 
                  +f ++  + +d++++P+Gy+++vl+ wG+++ ++  +++    +++++q + +g++hDgm++fpl+ + + +lL++NhEy++++ l+       ++++
  VIMSS341771  74 NFDSIPGSLTDAVSIPQGYTAQVLVPWGTPLNAQGSAWKndgsNTSSDQLNALGMHHDGMHFFPLNdSTTDGLLCINHEYIDTSALHpngptVANGVR 171
                  688899999************************9999999999999*******************8444456***************9*99999999* PP

         PhoX  90 vtaelvkkeqaagGvtvvevsrksgkwqvvrdsklnrritattemrlsGPAagsellktssdpegvkilGtlnNCagGtTpWGtyLtcEEnfdgyfgt 187
                  +  ++v+ke++a+Gv+vv+++ +++ w+      lnrr+t +t m lsGP a + l  t+ +p+g ++ GtlnNC++G+TpWGtyLtcEEn+ gyf +
  VIMSS341771 172 TIVDEVRKEINAHGVSVVRIQLEDNMWKLADTDPLNRRYTGATVMDLSGPVAHTALTVTRFSPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFVN 269
                  ****************************************************9999999***********************************9888 PP

         PhoX 188 ...vkkdqkryG...ettey................erFdva...........netkkfGyvvEvdpsdpestpvkltalGrfkHEavav.vvedpkr 251
                      +++q r+G   ++t+y                +rF+va           ne++ +Gy+vE+dp++++s+++k+talGrf+HE++a+  +e+ k 
  VIMSS341771 270 agtRTEEQDRIGvddKSTRYlwetlagnseerldefTRFNVAptgtssaddyrNEANGHGYIVEIDPYTQNSRAKKRTALGRFRHEGCAFgKLEAGKP 367
                  887899999***9988899999*******************************************************************945677777 PP

         PhoX 252 vvvYlgdDerkellYkFvpndrlrtgns......eanssLldeGtLqvaklnedelgaveWvdlvea.......taengfadqaevlvdtrlaadkvG 336
                  vv+Y+g D+r+e+lYkF ++    + +       ++  +  deGtL+va++ned   +++W++l+         t   +f++ ae+ ++t+ aad vG
  VIMSS341771 368 VVFYSGHDSRFEYLYKFESAAAWDPADAnpanrlATGDKYMDEGTLYVARFNED--STGTWLPLTLDsvttsggTLADHFNSLAEIIINTAGAADLVG 463
                  ********************9999988755555666667789************..89******877777555544888******************* PP

         PhoX 337 atkmdrpEgvavnPktkfaegevyvvltnngkr.skideanpraknkyGqivryipesrdaastkftldlflvaGdpedaea.asaessegndlespD 432
                  at mdrpE++ v+P t+    +vy++ltnn++r ++ + anpr +nk+G+++r+++ +    +t ft+d+f++ ++ +   + +  + +e n+++spD
  VIMSS341771 464 ATPMDRPEWCSVDPFTG----SVYLTLTNNTRRtDETNPANPRLNNKFGHVIRWDEGTS---ATDFTWDIFVFGSPANGDADtNRSGLNELNQFASPD 554
                  *****************....**********776889******************9988...99********998755433359999*********** PP

         PhoX 433 niavdpeGrlwiqeDgneskde..llgvtaeGkvynlarnqg..vltsderrgevkrfltepegsEftGvtfsPdgrtlfvnvqhPG 515
                  ++a+d +G lwiq+D  +++ +  +     +   ++l++++g   +++ +++ e+krf+ +p+g+E+tG t+sPd + lfvn+qhPG
  VIMSS341771 555 GLAFDGRGILWIQTDNGADEVTsyTNDQMLAVVPSKLTNENGaqAVIGADNQAELKRFFVGPNGCEVTGFTISPDYKSLFVNIQHPG 641
                  ****************9976554433333334456777777787677788899*********************************9 PP



Or compare VIMSS341771 to CDD or PaperBLAST