PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::2y7dD to PF05853 (BKACE)

biolip::2y7dD has 278 amino acids

Query:       BKACE  [M=274]
Accession:   PF05853.16
Description: beta-keto acid cleavage enzyme
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     8e-109  349.2   0.2     9e-109  349.1   0.2    1.0  1  biolip::2y7dD  


Domain annotation for each sequence (and alignments):
>> biolip::2y7dD  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  349.1   0.2    9e-109    9e-109       1     274 []       6     277 ..       6     277 .. 0.98

  Alignments for each domain:
  == domain 1  score: 349.1 bits;  conditional E-value: 9e-109
          BKACE   1 kviitvaltGaittkednpalPvtpeeiaeeaveaaeaGAaivHlHvRdpedgrpsqdpelfrevveaireaetdviiqlttggavlmtaeerlav 96 
                    ++i+t+a+tGa+tt++d+p+lP+tpee+a+ea++++eaGA ++HlH+R+ +dgrpsq++++f+e+++aire  +++iiq++tggav+ ++++rla+
  biolip::2y7dD   6 PLILTAAITGAETTRADQPNLPITPEEQAKEAKACFEAGARVIHLHIRE-DDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAP 100
                    68***********************************************.88******************************************** PP

          BKACE  97 vealkPemaslnlgslnfalkdevfentpedieellkrmkeagvkpeievfdvghlenaarllkeGllk.gplhvqfvlGvpgGmpatpenLl.fl 190
                    +++ kPema+ln+g+lnf  +d++f n+p+di +l++++k+++v+pe+ev++ g+++ +arl+k+G+++ +plh+qfvlGvpgGm+++p+nL+ ++
  biolip::2y7dD 101 LAL-KPEMATLNAGTLNF--GDDIFINHPADIIRLAEAFKQYNVVPEVEVYESGMVDAVARLIKKGIITqNPLHIQFVLGVPGGMSGKPKNLMyMM 193
                    *88.9*************..9***********************************************999**********************667 PP

          BKACE 191 ketadrlpegtwsvlgigraqlplaaaalalGghvRvGlEDnlylakgelaksNaelVeravriaeelgrevatpaeaReilgL 274
                    +++++++p +tw+v+gigr ++p    a+ +Ggh+R+G+EDn++++kg+ a+sNa+lV+r++ria+e+gr++atp++aReil L
  biolip::2y7dD 194 EHLKEEIPTATWAVAGIGRWHIPTSLIAMVTGGHIRCGFEDNIFYHKGVIAESNAQLVARLARIAKEIGRPLATPEQAREILAL 277
                    7777789*99***********************************************************************986 PP



Or compare biolip::2y7dD to CDD or PaperBLAST