PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS7575703 to PF05974 (DUF892)

VIMSS7575703 has 165 amino acids

Query:       DUF892  [M=159]
Accession:   PF05974.15
Description: Domain of unknown function (DUF892)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-47  148.2  14.9    1.2e-47  148.1  14.9    1.0  1  VIMSS7575703  


Domain annotation for each sequence (and alignments):
>> VIMSS7575703  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.1  14.9   1.2e-47   1.2e-47       2     156 ..       8     161 ..       7     164 .. 0.96

  Alignments for each domain:
  == domain 1  score: 148.1 bits;  conditional E-value: 1.2e-47
                   .HHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------.-HHHHTTT-----------THHHHHHH. CS
        DUF892   2 leelfideLrDlyaaEkqalkalpkmakaaespeLkaaleqHleeTqeqierLeqiferlgesasekkcdamegliaegqelieefaedeslkdaal 98 
                   l +l++ +L+ +y+aE+q l+a+++  + ++++eLk+ l+ H+e+Tq+qi+rLeq+++++g+++   +  am+gl++e q l+++  +  +++ a+l
  VIMSS7575703   8 LTDLYVLKLQEIYSAEQQGLQAMQQGCDMVQTSELKQGLTMHIEQTQQQIQRLEQLLQKMGAQPASDTNLAMKGLVQELQRLMQQ-DASPEVLEAGL 103
                   88**********************************************************************************9.8888899**** PP

                   ..HHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        DUF892  99 iaaaqavehyEiasYgtLialAeqlgdkeaaelLeetldeekatdekLtelaeslvnq 156
                   ia +qa+ehyEia+Ygt++++A+ lgd+ea+++Le+tldeek+tdekL+ +a+++  q
  VIMSS7575703 104 IACQQAMEHYEIAGYGTARTYAQLLGDDEAVQMLERTLDEEKMTDEKLSMIAQQINVQ 161
                   ***************************************************9866444 PP



Or compare VIMSS7575703 to CDD or PaperBLAST