PaperBLAST – Find papers about a protein or its homologs

 

Align WP_001056488.1 to PF05974 (DUF892)

WP_001056488.1 has 166 amino acids

Query:       DUF892  [M=159]
Accession:   PF05974.15
Description: Domain of unknown function (DUF892)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-57  178.4  13.4      6e-57  178.3  13.4    1.0  1  WP_001056488.1  


Domain annotation for each sequence (and alignments):
>> WP_001056488.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.3  13.4     6e-57     6e-57       1     159 []       5     163 ..       5     163 .. 0.97

  Alignments for each domain:
  == domain 1  score: 178.3 bits;  conditional E-value: 6e-57
                     ..HHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHHHHHHHHHHHHHHHHH.TT-------.-HHHHTTT-----------THHHH CS
          DUF892   1 tleelfideLrDlyaaEkqalkalpkmakaaespeLkaaleqHleeTqeqierLeqifer.lgesasekkcdamegliaegqelieefaedeslk 94 
                     t+e++fi+ L D+y+aEkq++ al k+a+a ++++L++a+  HleeT++qier++q++e+  + + +++kc amegli+e++e+ie+  e+++++
  WP_001056488.1   5 TIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESeSNLKIKRMKCVAMEGLIDEANEVIES-TEKNEVR 98 
                     579*******************************************************9736889*********************9.******* PP

                     HHH...HHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH. CS
          DUF892  95 daaliaaaqavehyEiasYgtLialAeqlgdkeaaelLeetldeekatdekLtelaeslvnqeaa 159
                     daaliaaaq+vehyEiasYgtL++lAeqlg  +aa+lL+etl+eekatd kLt+la + vn++a+
  WP_001056488.1  99 DAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLALNNVNKKAE 163
                     *************************************************************9985 PP



Or compare WP_001056488.1 to CDD or PaperBLAST