PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS170140 to PF06073 (DUF934)

VIMSS170140 has 169 amino acids

Query:       DUF934  [M=107]
Accession:   PF06073.15
Description: Bacterial protein of unknown function (DUF934)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-30   90.6   0.0      4e-30   90.2   0.0    1.2  1  VIMSS170140  


Domain annotation for each sequence (and alignments):
>> VIMSS170140  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.2   0.0     4e-30     4e-30       2      77 ..      70     151 ..      69     165 .. 0.87

  Alignments for each domain:
  == domain 1  score: 90.2 bits;  conditional E-value: 4e-30
       DUF934   2 vllasdedveela......adlerlalialefpkFtDGRgySqarlLRerlgykgelrAvGdvlrDqlallkrcGfdafelk 77 
                  v+la+d+d++ l        d + la+ia++fp +tDGRgyS+a+lLR+ lg++g lrAvGdv++D++++l+rcGfd+f+lk
  VIMSS170140  70 VWLAPDADPAGLLepgattIDPTGLAMIAIDFPVYTDGRGYSIAQLLRHPLGWQGALRAVGDVMIDTVHYLARCGFDSFALK 151
                  888888888666534433257889*******************************************************996 PP



Or compare VIMSS170140 to CDD or PaperBLAST