VIMSS550938 has 497 amino acids
Query: DUF935 [M=517]
Accession: PF06074.16
Description: Protein of unknown function (DUF935)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-149 485.4 0.0 1.5e-149 485.1 0.0 1.0 1 VIMSS550938
Domain annotation for each sequence (and alignments):
>> VIMSS550938
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 485.1 0.0 1.5e-149 1.5e-149 35 517 .] 27 492 .. 13 492 .. 0.97
Alignments for each domain:
== domain 1 score: 485.1 bits; conditional E-value: 1.5e-149
DUF935 35 ehpssgLtparlarilreae.....qGd.ilaqleLaedmEekdahlaselstRkravlgldwevepasddaaeekladavrelledldnledllfdl 126
++s+++++++l+++l++++ qG i++++eL ++d+ +++++++Rk+ v++l+ +ve+ ++a +++++++r++l+dld+ ++++ ++
VIMSS550938 27 ASRSRSIDFYSLGTYLPNPDtilkaQGRdIRVYREL-----RTDPLVGGCIRRRKAGVKALERGVER---SNAPVRVFNFIRDMLADLDM-SRIIGEM 115
5799***********************88*******.....**************************...99******************.******* PP
DUF935 127 lDAigkGfsvlEieWetsggewvpkalewrdprwfqfdredrnelrlrdateegeelppfkfvvhrhkaksglpiragllrvlaWpylfknyslkdwa 224
+DA+++G++++E++W+++ ++w ++++++++p+wf++dr++++++r rda+ ege++p +kfv++r++a++++p+++++l++++Wp++fk++++k+w+
VIMSS550938 116 HDAVLYGYQPCELMWNQN-QSWSVTDIVSKPPDWFHYDRDNQLRFRARDAGVEGERVPLYKFVTPRQDATYDNPYGFPDLSMCFWPVTFKKGGMKFWV 212
*****************8.66***************************************************************************** PP
DUF935 225 eFlEvYGlPlrlGkYpagAseeeketLlravasigsdAaaiiPesmeiefkeaak.agssdlfealaewcdkqiSkaiLGqTlTtdadggssnAlgkv 321
+F+E+YG+P+++Gk+p+g+ ++e++ Ll++++++++dA+a+iP+++++e+keaa ++ssd++++l+++++++iS+a+LGq++Tt+a +s++A++++
VIMSS550938 213 RFAEKYGSPWVIGKHPRGTPQSEIDLLLDSMEAMIDDAVAAIPDDSSVEIKEAAGkSDSSDIYQNLITVARSEISIALLGQNQTTEA--NSNKASAQA 308
*******************************************************9*******************************..89******* PP
DUF935 322 hneVreDirdaDakqlaatlnrdlirplvalNfgsqerlPrfefdveepeDlkalaealekLvklGlrvpasevrdklglpepekdeevlkaaaaaep 419
+ eV++DirdaDa+++++++n + ir++v+lNfg + ++P++++++++++D +++a+++ kL+++G+r+++++++++++l++ + de++l+ ++
VIMSS550938 309 GLEVTDDIRDADADVITSAIN-QTIRWVVELNFG-NVECPVYRLWEQQSVD-ETQANRDVKLSQAGVRFTPQYWKREYQLQDGDIDETTLS-----TT 398
*********************.************.****************.***************************************.....77 PP
DUF935 420 eaaaapaalaaaaalaaqaaaeaaeqdalDaladealaes..qaalepllapvlellqkaesleellarlaelypemdaeelaelLaralfvAdllGr 515
+ +++p a+ +++ +a+ a+qd+lD+++d +++e +++le+ll p++ ++q++ ++ +l+ +laelyp+mdae l+e+Lar+lfv++++Gr
VIMSS550938 399 PIPPLPLAF------SEAVHADLAAQDTLDEALDILMNEGslNESLESLLLPLFYRVQNGVNPSDLTGELAELYPHMDAEGLQEQLARVLFVSNIWGR 490
777777434......45789*******************999******************************************************** PP
DUF935 516 le 517
l+
VIMSS550938 491 LH 492
86 PP
Or compare VIMSS550938 to CDD or PaperBLAST