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Align VIMSS140426 to PF06097 (DUF945)

VIMSS140426 has 516 amino acids

Query:       DUF945  [M=459]
Accession:   PF06097.15
Description: Bacterial protein of unknown function (DUF945)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   7.6e-112  360.7   3.4   8.7e-112  360.5   3.4    1.0  1  VIMSS140426  


Domain annotation for each sequence (and alignments):
>> VIMSS140426  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  360.5   3.4  8.7e-112  8.7e-112       1     457 [.       1     498 [.       1     500 [. 0.97

  Alignments for each domain:
  == domain 1  score: 360.5 bits;  conditional E-value: 8.7e-112
       DUF945   1 MKKslvavgvvvalgaawtGaswytGkqaeqrldalvaqlneqlakalpeeglsYerGfFsStatyvlq..........aqgpdndeegqpvslvlds 88 
                  MKK   +++v++al+++ +G+++y+G +ae++l+++ + l+e+++++++++  +YerG+F+S++t+v++          +  pdn ++  ++ ++l++
  VIMSS140426   1 MKK--PLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFLTVESH--QYERGWFTSMETTVIRlkpellnnarKYLPDNLKTVLEQPVTLVN 94 
                  9**..569999****************************************..********************************************* PP

       DUF945  89 tidHGPlplsrkfnlipalAsvhtelendeatkklfeka.kgksPltidtrvgysGstsselslpafdyeedg.eklnfsGldlkvdlskdlkkvkle 184
                  +i+HGP++++       ++A+++te++  ++t+k +e++ +++ P ++ ++v ++Gs+++e+s+pafdyee    +l+++Gl++++ ++k++k+++  
  VIMSS140426  95 HITHGPFAGGF-----GTQAYIETEFKYAPETEKVLERFfGKQVPASLANTVYFNGSGKMEVSVPAFDYEELSgIRLHWEGLTGETVYQKGFKSYRNG 187
                  ***********.....*****************************************************55445************************ PP

       DUF945 185 gdlpglqveaankeslelkgltldsdlkrgkeglylGdsslkidslsvssegke...............................gvelkglsldsds 251
                   d+p ++++ a+k++++++++++ds+++ g + l lG+s+l+++++s++++++                                 +e+ +l++++++
  VIMSS140426 188 YDAPLFKIKLADKGDAAFEKVHFDSETSDGINPLALGSSNLTLEKFSLEWKEGVdynvklnelvnlvtdlqigafinpngsiapsKIEVGKLAFSTKT 285
                  ******************************************************999999999999999988888888777665444*********** PP

       DUF945 252 tedgdflnsqlkysldslkvngkdlgslqlklslnnLDaaalqalseayqqlqakalaakdpeelqealeealkaalpkLLkknPeleidplslknpk 349
                   e g f+ns++++++d+l ++++++g+l++++++++LDa+al  l +++ q++ak+   +++e+ +++l +a+k ++++L+++nP+l i+ +++++p+
  VIMSS140426 286 GESGAFINSEGQFRFDTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKFAQISAKK---MTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTLPS 380
                  ********************************************************...789************************************ PP

       DUF945 350 Gestlnlsldledsakddaenlaqllkkleldaklslpkamleelltqaaasqegad..........aedaekqakqqveellqmlqmqglltlegda 437
                  G++++ +++ ++d +k+d ++l  +lkk+e+d+++s+p++mle+l+ ++a + ++++           +d++++ + +v++++q+++ +++ltl+gd+
  VIMSS140426 381 GKIDVGGKIMFKDMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNaedeaegrasLDDINETLRLMVDSTVQSMAREKYLTLNGDQ 478
                  ********************************************************9***************************************** PP

       DUF945 438 iksslqyadGqvtlNGkkmp 457
                  i ++++++++q++lNGk+++
  VIMSS140426 479 IDTAISLKNNQLKLNGKTLQ 498
                  *****************986 PP



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