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Align VIMSS17902 to PF06097 (DUF945)

VIMSS17902 has 476 amino acids

Query:       DUF945  [M=459]
Accession:   PF06097.15
Description: Bacterial protein of unknown function (DUF945)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.1e-110  355.0   9.1   4.8e-110  354.8   9.1    1.0  1  VIMSS17902  


Domain annotation for each sequence (and alignments):
>> VIMSS17902  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  354.8   9.1  4.8e-110  4.8e-110       3     458 ..       4     464 ..       2     465 .. 0.98

  Alignments for each domain:
  == domain 1  score: 354.8 bits;  conditional E-value: 4.8e-110
      DUF945   3 KslvavgvvvalgaawtGaswytGkqaeqrldalvaqlneqlakalpeegl.....sYerGfFsStatyvlq.aqgpdndeegqpvslvldstidHGPl 95 
                 K   a+gv+val+++w+G++wytG+q++  ++++++++n++ +k  +  ++     ++++GfF S+ +++++ ++g+++ + ++++++v+d +++HGPl
  VIMSS17902   4 K--SATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMtlsyqNFDKGFFNSRFQMQMTfDNGAPDLNIKPGQKVVFDVDVEHGPL 100
                 5..689***********************************9999999999************************************************ PP

      DUF945  96 plsr..kfnlipalAsvhtelendeatkklfekakgksPltidtrvgysGstsselslpafdyeedgeklnfsGldlkvdls.kdlkkvklegdlpglq 191
                 p++   ++n+ipalA ++ +l+n+e t++lf +ak+ksP++++ r++++Gs+s++l++++ +y    +k++f  ++++++ + + l+++++eg+++ ++
  VIMSS17902 101 PITMlmHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEY----GKFSFGEGQFTFNGDgSSLSNLDIEGKVEDIV 195
                 ***************************************************************....******************************** PP

      DUF945 192 veaankeslelkgltldsdlkrgkeglylGdsslkidslsvssegkegvelkglsld..sdstedgdflnsqlkysldslkvngkdlgslqlklslnnL 288
                 ++    ++++ k++t+ds ++  ++++ +G+s+ k++++++ ++g+++++++ +  +   d  +d+d +n++l+y+ld+l  ++++lgs++++l ++ +
  VIMSS17902 196 LQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHGEDVAQIDAFVAKtrLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESI 294
                 ****9*************************************************9998899999*********************************** PP

      DUF945 289 Daaalqalseayqqlqakalaa.....kdpeelqealeealkaalpkLLkknPeleidplslknpkGestlnlsldledsakddaenlaqllkklelda 382
                 D +a+++++ +y+  ++k+laa     +d+ +lqe +++++k++lp L k +P+++ +p+++kn+ Ge+++nl++++  ++++++++ ++ +k+  l++
  VIMSS17902 295 DPSAVRQFIIQYNIAMQKQLAAhpelaNDEVALQEVNAALFKEYLPLLQKSEPTIK-QPVRWKNALGELNANLDISI-ADPAKSSSSTNKDIKS--LNF 389
                 **************************9999999**9*****************777.69******************.68999999********..*** PP

      DUF945 383 klslpkamleelltqaaasqegadaedaekqakqqveellqmlqmqglltlegdaiksslqyadGqvtlNGkkmpl 458
                 +++lp  +++e ++q+ + +eg+dae+a+kqa++q+++++  +qm++l+t ++++ +++l y  G+v +NG++m++
  VIMSS17902 390 DVKLPLNVVTETAKQL-NLSEGMDAEKAQKQADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSE 464
                 ****************.999******************************************************96 PP



Or compare VIMSS17902 to CDD or PaperBLAST