PaperBLAST – Find papers about a protein or its homologs

 

Align Q5Z9Z3 to PF06110 (DUF953)

Q5Z9Z3 has 139 amino acids

Query:       DUF953  [M=119]
Accession:   PF06110.11
Description: Eukaryotic protein of unknown function (DUF953)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-35  106.3   0.0    4.4e-35  106.2   0.0    1.1  1  Q5Z9Z3    


Domain annotation for each sequence (and alignments):
>> Q5Z9Z3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   0.0   4.4e-35   4.4e-35      16     115 ..      26     133 ..       9     137 .. 0.87

  Alignments for each domain:
  == domain 1  score: 106.2 bits;  conditional E-value: 4.4e-35
             .TSSSEEEEEEB--B-.TTS-BSSHHHHHHHHHHHHHHHH-SS....-EEEEEEE---HHHHT-TTSHHHH..TS---SSSEEEEETSS...-EE-HHHHH-H CS
  DUF953  16 ekeskivfilFlgekd.teGesWCPdCvkaepvieealkeape....dvklvrvdvGdrevWkdpanpfRkdpklkltgvPtLlrwkgk...krLeeeqiakk 110
             + e k   +lFl+++d  + + WCPdC +aepvi++ ++ a++    dv+l+r++vGd+++W+dpa+p+R dp+++ltgvPtL+rw++     rL +++++  
  Q5Z9Z3  26 DAEGKVKLLLFLADRDaSSNQTWCPDCNVAEPVIYDRVEAAAKgkekDVVLLRAYVGDKPTWRDPAHPWRADPRFRLTGVPTLIRWENGaaaARLGDDEAHLA 128
             456788899*******9999*******************99877888***************************************98644578*9*999998 PP

             HHHHH CS
  DUF953 111 sLvel 115
             + v+ 
  Q5Z9Z3 129 DKVDA 133
             87765 PP



Or compare Q5Z9Z3 to CDD or PaperBLAST