SwissProt::T1SH39 has 123 amino acids
Query: DUF953 [M=119]
Accession: PF06110.11
Description: Eukaryotic protein of unknown function (DUF953)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-45 139.6 0.0 2.1e-45 139.4 0.0 1.0 1 SwissProt::T1SH39
Domain annotation for each sequence (and alignments):
>> SwissProt::T1SH39
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 139.4 0.0 2.1e-45 2.1e-45 1 119 [] 8 122 .. 8 122 .. 0.97
Alignments for each domain:
== domain 1 score: 139.4 bits; conditional E-value: 2.1e-45
EEEHHHHHHHHHHH..TSSSEEEEEEB--B-TTS-BSSHHHHHHHHHHHHHHHH-SS-EEEEEEE---HHHHT-TTSHHHH..TS---SSSE CS
DUF953 1 sakgyeefekslkelekeskivfilFlgekdteGesWCPdCvkaepvieealkeapedvklvrvdvGdrevWkdpanpfRkdpklkltgvPt 92
+++gy+ef +++ e ++ k +f++F+g+kd +G+sWCPdCv+aep+++ + ++pe +++++++vG+r++Wkd n f+k +lkl gvPt
SwissProt::T1SH39 8 NVRGYDEFCQAVSE--RKGKDIFAYFSGDKDASGKSWCPDCVTAEPIVRGQMSHLPEGSVFIYCQVGERAYWKDSTNAFKK--TLKLSGVPT 95
589*********99..7779*************************************************************..89******* PP
EEEETSS-EE-HHHHH-HHHHHHHHH- CS
DUF953 93 LlrwkgkkrLeeeqiakksLvellfee 119
Llr++++++L ee++ k +Lv+++f+e
SwissProt::T1SH39 96 LLRYGTPQKLVEEECFKADLVRMMFTE 122
*************************97 PP
Or compare SwissProt::T1SH39 to CDD or PaperBLAST