PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS6574944 to PF06198 (DUF999)

VIMSS6574944 has 280 amino acids

Query:       DUF999  [M=143]
Accession:   PF06198.15
Description: Protein of unknown function (DUF999)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.4e-96  304.2   5.8    8.7e-96  303.8   5.8    1.2  1  VIMSS6574944  


Domain annotation for each sequence (and alignments):
>> VIMSS6574944  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.8   5.8   8.7e-96   8.7e-96       1     143 []      21     163 ..      21     163 .. 0.99

  Alignments for each domain:
  == domain 1  score: 303.8 bits;  conditional E-value: 8.7e-96
        DUF999   1 mvedvcnvdleqgldlckpekvnkqsqrsrqsrqslftniikpqkdklniktnkikeflndlftefskfhnsyypdgristrsklrwvlliiwsiii 97 
                   mvedvcnvdleqgldlckpekvnkqsqrsrqsrqslftn+ikpqkdk+niktnkikeflndlftefskfhnsyypdgristrs++rw+lliiwsiii
  VIMSS6574944  21 MVEDVCNVDLEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKFHNSYYPDGRISTRSNFRWPLLIIWSIII 117
                   9************************************************************************************************ PP

        DUF999  98 vlaidkkfevkeflsiwinenrfyseiwgpiaiyvcllvllllali 143
                   v+a+dkkfev++flsiwinenrfyseiw+piaiyvcllvl+ll+li
  VIMSS6574944 118 VFAVDKKFEVQKFLSIWINENRFYSEIWVPIAIYVCLLVLMLLSLI 163
                   *******************************************996 PP



Or compare VIMSS6574944 to CDD or PaperBLAST