NP_001256040.1 has 463 amino acids
Query: SLC52_ribofla_tr [M=429]
Accession: PF06237.16
Description: Solute carrier family 52, riboflavin transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-136 441.6 18.5 2.1e-136 441.3 18.5 1.0 1 NP_001256040.1
Domain annotation for each sequence (and alignments):
>> NP_001256040.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 441.3 18.5 2.1e-136 2.1e-136 2 429 .] 4 455 .. 3 455 .. 0.87
Alignments for each domain:
== domain 1 score: 441.3 bits; conditional E-value: 2.1e-136
SLC52_ribofla_tr 2 sllvhlLvilFgigsWvainglwveLPllvkelPEgwnLpsyLvviiqlanlGPllvtllhk.lapgklnealviyvilvlgvvaslllaffw 93
s+ + +Lv+lFg +sW+++n++w++LPll++elPE+wnLpsyL+ ++q+a++ Pl++t+lhk +++ ++ +a++i+++l+l+++++l l+ffw
NP_001256040.1 4 SAATFILVALFGSSSWMGTNSVWMQLPLLTSELPEQWNLPSYLAGVVQIACIVPLIYTILHKgVKSFTIPTAPLIIALLSLACCCQLGLSFFW 96
67899*********************************************************67788999*********************** PP
SLC52_ribofla_tr 94 ketvvvageerSvallvltfflalvdctSsVtFlpfmarlkekYlttyfiGeGlSgllPslvaLiqGvgneecvnvtkteeteeeleleavyl 186
++ + ++g++rS++l+ l+f la+v+++S+V+F+pfma+++++Yl++yf+G+GlS+l Psl++L+qG+++ +c+++ a+
NP_001256040.1 97 SDYSEIFGAPRSWPLYSLLFGLAIVNAMSNVLFMPFMAQFHPAYLNAYFVGMGLSSLAPSLLSLAQGTSMFKCDEKGV-----------AERF 178
*************************************************************************99776...........5679 PP
SLC52_ribofla_tr 187 pprFsaevfflllsvllvvslvaFllLnklpsakkerekeesseekes......eeeeeeeepkkeskeevk..................... 252
pp+Fs+++ff++++ +++v+l aF++L ++ + ++ + ++++ ++ + ++++++++ +e+ +
NP_001256040.1 179 PPNFSVSIFFFVIFSFTCVALFAFIALYRSGAHTHFATPNKKEPNEGTplkkdlNNTSSSRKGDDED----Espieihetgapaidaivseld 267
******************************5555555444444433333221111222222222222....1244566777777788877776 PP
SLC52_ribofla_tr 253 .........kkepeeeee.......kkklskaqlvyllvllavvnaltngvlpSvqsYsclpYgnlaYhlavtlasianPlacflamflkvrs 329
+ + ++ ++++ll+++a+vna +ng+++SvqsY++lpY++ +Yh+avtl+++++Pl++fl +f++vrs
NP_001256040.1 268 vtfrersamI-------NddsephpVDYITGVKFTFLLFTTALVNAQMNGIITSVQSYAALPYSQATYHFAVTLSNVVSPLSSFLPFFISVRS 353
6666554322.......033344558888**************************************************************** PP
SLC52_ribofla_tr 330 lvllgvlsllgtlfgayilalAalspcpllvgstlGevlvvlswillvgllsYvkvvigvllree..ghsaLvwvGaviqlGSliGalvmFpl 420
+++l +l++++t+++a+i++lAalsp+ ++++ t+G++l + +++++gl+sY++vv+++llre ++s L+w+G++iq+GS+iG+ vmFpl
NP_001256040.1 354 IPVLAILTACSTAMTAFIVYLAALSPNLIFNSVTIGSALSIGGSLIAAGLHSYLRVVFASLLREGhqSESRLFWCGVFIQIGSFIGSAVMFPL 446
***************************************************************85224555********************** PP
SLC52_ribofla_tr 421 vnvyklFks 429
vn+++lF+s
NP_001256040.1 447 VNIAHLFTS 455
*******86 PP
Or compare NP_001256040.1 to CDD or PaperBLAST