PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS202166 to PF06496 (DUF1097)

VIMSS202166 has 163 amino acids

Query:       DUF1097  [M=142]
Accession:   PF06496.15
Description: Protein of unknown function (DUF1097)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      5e-41  126.4  27.8    5.7e-41  126.2  27.8    1.0  1  VIMSS202166  


Domain annotation for each sequence (and alignments):
>> VIMSS202166  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.2  27.8   5.7e-41   5.7e-41       1     141 [.       8     141 ..       8     142 .. 0.98

  Alignments for each domain:
  == domain 1  score: 126.2 bits;  conditional E-value: 5.7e-41
      DUF1097   1 alsvgvlaalwallaatlgelpvWagFigwasffaaGg.glkgllksllsnllGvvwallaillisllgpnlgllallvvgivaflmvllakipllsf 97 
                  a+s+g+laa+w+++a t++ l++W+gF+g+++ffa+++ g +g+++++++nl+Gv+wa+l+i ++s + +  +++++l++gi + +m+l+a++++lsf
  VIMSS202166   8 AISAGLLAAIWCGIADTFH-LVTWIGFLGCSTFFAQPKaGFQGVMMAWCTNLSGVFWAWLIISGSSFFVS--PVMGYLFTGIATSAMCLQASYQKLSF 102
                  89*****************.***********************************************988..************************** PP

      DUF1097  98 iPaaflGlastfatllatlsgpllavavslalGavfGyasella 141
                  iP+af+G+++tfa     + g+++ +++ l+lGa++G++++ll+
  VIMSS202166 103 IPGAFIGCCITFA-----MAGDVVNIVPPLVLGALLGFCMSLLT 141
                  *************.....999*******************9987 PP



Or compare VIMSS202166 to CDD or PaperBLAST