PaperBLAST – Find papers about a protein or its homologs

 

Align XP_001220467.1 to PF06500 (FrsA-like)

XP_001220467.1 has 431 amino acids

Query:       FrsA-like  [M=414]
Accession:   PF06500.15
Description: Esterase FrsA-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-10   25.1   0.0    5.7e-10   24.5   0.0    1.2  1  XP_001220467.1  


Domain annotation for each sequence (and alignments):
>> XP_001220467.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   5.7e-10   5.7e-10     147     298 ..     102     268 ..      30     278 .. 0.70

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 5.7e-10
       FrsA-like 147 eqaqvlanra..yeeaakklpy.tlkqlefsvqdgk.kiagflhlpktdapl....pvvlvsaGldslqtdyyrlfrdylapkdiamltidlpsv 233
                      q +v    a  + +aa   ++  +++le+++++g  ++ ++l+lp  d++l    p+++ s+G d+lq +++ ++ +     + a+lt + p  
  XP_001220467.1 102 RQLEVCERVAslFGKAATLFDHcDFHRLEIPYKEGGlTLPAYLYLPPHDKRLpgkiPILISSGGADALQEELFYMHPSAGPSLGYAVLTFEGPGQ 196
                     34444433332245566665541589******98653899******99986511116788899******************************** PP

       FrsA-like 234 Gassk...wkltedssllhqavlkaladv....p..wvdhtrvalvGfrfGanvavrlaylesekvkavvalGa 298
                     G + +    k+  d   +   vl  l  +    p   +d  r+a+ G  +G+  a r a   ++++ka+val +
  XP_001220467.1 197 GLTLRrhnLKMRPDWEAVIGVVLSFLERLsetrPelELDTSRIAIAGASLGGYFALRSAV--DPRIKACVALDP 268
                     *87542226788899999999988777662223333479******************985..89*******987 PP



Or compare XP_001220467.1 to CDD or PaperBLAST