PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS149763 to PF06572 (DUF1131)

VIMSS149763 has 191 amino acids

Query:       DUF1131  [M=170]
Accession:   PF06572.16
Description: Protein of unknown function (DUF1131)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-85  271.2   0.1    1.9e-85  271.1   0.1    1.0  1  VIMSS149763  


Domain annotation for each sequence (and alignments):
>> VIMSS149763  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  271.1   0.1   1.9e-85   1.9e-85       2     170 .]      24     191 .]      23     191 .] 0.99

  Alignments for each domain:
  == domain 1  score: 271.1 bits;  conditional E-value: 1.9e-85
      DUF1131   2 lsWsslsPlnWfgsslkvteqGvgelnastaltesaiekaldgdyrlrsGmktenGqlvkvfealkddkvklvisGqekgkverievldkdiksesgv 99 
                  ++Ws+++P+nWfgss++vteqGvg+l+a+t+l+e ai++aldgdyrlrsGmkt+nG++v++fea+k d+v++vi+G e+g+v+ri+vld+di++++g 
  VIMSS149763  24 VNWSAANPWNWFGSSTEVTEQGVGALTAATPLEEPAIAEALDGDYRLRSGMKTDNGNVVRFFEAMKGDSVAMVING-EQGTVSRIDVLDSDIPTAAGG 120
                  79**************************************************************************.9******************** PP

      DUF1131 100 kiGtafsdlyskafgackkasgddkasveckapqskhvsylfsGeWsGPeglmPsddilknWkvskivWrr 170
                  kiGt+fsdlyskafg c+ +s+d ++svecka+ s+h+sy+fsGeWsGPeglmP+dd+lknW v ki+Wrr
  VIMSS149763 121 KIGTPFSDLYSKAFGHCEPVSSDSHTSVECKAEGSQHISYVFSGEWSGPEGLMPPDDVLKNWDVRKIIWRR 191
                  *********************************************************************97 PP



Or compare VIMSS149763 to CDD or PaperBLAST