VIMSS1873 has 318 amino acids
Query: DUF1175 [M=218]
Accession: PF06672.15
Description: Protein of unknown function (DUF1175)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.8e-103 328.6 0.0 1.1e-102 328.4 0.0 1.0 1 VIMSS1873
Domain annotation for each sequence (and alignments):
>> VIMSS1873
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 328.4 0.0 1.1e-102 1.1e-102 2 218 .] 94 318 .] 93 318 .] 0.99
Alignments for each domain:
== domain 1 score: 328.4 bits; conditional E-value: 1.1e-102
DUF1175 2 lavalkesdedrdgdp.lallspedseafRewfvriaesqirretsrweeeerDCaglvRfavrEalkkhdarwlkksgis...vedvekylyPelplvg 97
++++++e+d+d dg+p +++l++edse+fR+wfv+ia+s++++++ +w++eerDC+g+vR+++rEalkkh+++w++ sg++ +edveky+yP+lplvg
VIMSS1873 94 IEARASEEDSDGDGYPdSLELDSEDSERFRNWFVWIALSAFKNDPLLWPKEERDCSGFVRYCAREALKKHTGSWFSLSGYNgpvWEDVEKYNYPNLPLVG 193
567899********************************************************************************************** PP
DUF1175 98 aklfriekgkyrsdgefgafadAktlveenlrfvskdveeAlpgDl.vFfkqeddesPyHlmifvgd....daeelivYHtGpegesdgelRaVrlseLl 192
+k+friekg+yr +++f++fa A++lve++++fv+k+v+eAlpgD+ vFf++ed+e+PyHlmifvg+ d+e ++vYHtGp+ge++gelR+Vr+seL+
VIMSS1873 194 TKMFRIEKGAYRGVEDFSNFAVARILVECSMEFVTKSVSEALPGDIaVFFHPEDVEMPYHLMIFVGNlnlaDHEGWFVYHTGPIGENPGELRFVRYSELV 293
**************************************************************************************************** PP
DUF1175 193 klkDprWrPlekNpnFlGvyrlkflk 218
++ Dp+W+Ple Np+FlG+yr++flk
VIMSS1873 294 NY-DPSWAPLEINPYFLGFYRFRFLK 318
**.*********************97 PP
Or compare VIMSS1873 to CDD or PaperBLAST