VIMSS16565 has 347 amino acids
Query: DUF1176 [M=326]
Accession: PF06674.15
Description: Protein of unknown function (DUF1176)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-114 368.5 0.0 2.2e-114 368.3 0.0 1.0 1 VIMSS16565
Domain annotation for each sequence (and alignments):
>> VIMSS16565
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 368.3 0.0 2.2e-114 2.2e-114 1 326 [] 25 347 .] 25 347 .] 0.96
Alignments for each domain:
== domain 1 score: 368.3 bits; conditional E-value: 2.2e-114
DUF1176 1 qksfkDwevaCdNtrtCraaglaseegeapvsltlsReAgaeadlslrlslaekdke....kagklrllvDgkdlgevtvtadeee....tldaaqvta 91
q++f+Dw+v+C+N+++C+a++++ ++g ++tlsR+Aga++d+ lr+++++ +++ ++++rll+Dg++l+ + + + t+d+a++ta
VIMSS16565 25 QRAFSDWQVTCNNQNFCVARNTGDHNGL---VMTLSRSAGAHTDAVLRIERGGLKSPeaseGEIAPRLLLDGEPLALSGDKWRISPwllvTDDTATITA 120
689*******************999999...**********************999989888999**********744433333338999********* PP
DUF1176 92 llaalknakklelknggktvtlSlsGlaaaLlymDeqQgRvgtvtAlvkkGdkpesavppapaapeikaaetaaapkedlseeelqkllkallkakklr 190
+l++++++k+++l++g++t +SlsGl+aaLl++D+qQ+Rvg++tA++kkGd+p+ +vppapa++e++ ++++++p ls ee+++ll+ ++++r
VIMSS16565 121 FLQMIQEGKAITLRDGDQT--ISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTP---LSLEERNDLLD----YGNWR 210
*******************..*******************************************************...**********9....***** PP
DUF1176 191 lededcedeppeaereaevtrLsdtkaLvllsCgagAYNeayalwvvtrakplearlltls..a.dseeskedllvnadydeatgtlsslakgrGlGDC 286
++ +c+++p ++e + vt+L+d+kaL+++sC+agAYN+++ +w+v+r+kpl++r ++l+ + +++e++e +l+na++de++++l++lakgrGl+DC
VIMSS16565 211 MNGLRCSLDPLRREVN--VTALTDDKALMMISCEAGAYNTIDLAWIVSRKKPLASRPVRLRlpFnNGQETNELELMNATFDEKSRELVTLAKGRGLSDC 307
**************99..*******************************************9955********************************** PP
DUF1176 287 gisarWvwdGkrFvlveaaaegeCrgiaaggaWpllwvvr 326
gi+arW++dG+rF+lv++aae++C+++++++aWp+lw++r
VIMSS16565 308 GIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR 347
**************************************96 PP
Or compare VIMSS16565 to CDD or PaperBLAST