VIMSS253153 has 342 amino acids
Query: DUF1176 [M=326]
Accession: PF06674.15
Description: Protein of unknown function (DUF1176)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.3e-105 337.2 1.7 7.2e-105 337.0 1.7 1.0 1 VIMSS253153
Domain annotation for each sequence (and alignments):
>> VIMSS253153
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 337.0 1.7 7.2e-105 7.2e-105 2 325 .. 27 337 .. 26 338 .. 0.98
Alignments for each domain:
== domain 1 score: 337.0 bits; conditional E-value: 7.2e-105
DUF1176 2 ksfkDwevaCdNtrtCraaglaseegeapvsltlsReAgaeadlslrlslaekdke.kagklrllvDgkdlgevtvtadeee.tldaaqvtallaalk 97
+s++Dw++aCdNtrtCraag++++++++pvs++l+R+Aga+++++++l+l+++dk + ++l+l++D++++g++ +++++ + l++aqv allaal
VIMSS253153 27 FSHDDWTIACDNTRTCRAAGYQADDSDPPVSVLLTRKAGAGQAVTAELMLGQYDKVkMPASLSLQIDQRNQGKLALDGKRGTaVLTSAQVGALLAALP 124
89*****************************************************9899****************999998899************** PP
DUF1176 98 nakkl.elknggktvtlSlsGlaaaLlymDeqQgRvgtvtAlvkkGdkpesavppapaapeikaaetaaapkedlseeelqkllkallkakklrlede 194
+++k+ +l n+g++++lS++G+aa+Ll+mDe+QgR+gt++Alv+kGd++e+av+p+ +ap+++aa+ aaa++ d + +l +l++al++ + + de
VIMSS253153 125 RSSKIvALGNDGRRWQLSDRGAAAVLLKMDEFQGRIGTRGALVRKGDRDETAVLPPLPAPQVRAAKLAAAQAGDARLGTLPALYQALRA---TLPADE 219
****989****************************************************************999***********9999...99**** PP
DUF1176 195 dcedeppeaereae.vtrLsdtkaLvllsCgagAYNeayalwvvtrakplearlltlsadseeskedllvnadydeatgtlsslakgrGlGDCgisar 291
+c++ ++++ +e+ vtrL+++k Lv+++C++gAYN ++ +wvv+ ++p++++l+tl+ ++d+ + +t+ +++kgrGlGDC+++a+
VIMSS253153 220 ECKGLDASDASEPLnVTRLTNDKLLVSTDCWMGAYNIGTGFWVVNARAPFTPTLVTLH------------ASDL--DGATILESQKGRGLGDCYSQAA 303
****99999998889*******************************************............9***..99******************** PP
DUF1176 292 WvwdGkrFvlveaaaegeCrgiaaggaWpllwvv 325
W+wdG+rFvl++++++g Cr +aaggaW+l++vv
VIMSS253153 304 WTWDGRRFVLTSKSTSGLCRLVAAGGAWELPTVV 337
*******************************998 PP
Or compare VIMSS253153 to CDD or PaperBLAST