NP_001193113.1 has 193 amino acids
Query: DUF1180 [M=167]
Accession: PF06679.16
Description: Protein of unknown function (DUF1180)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-79 250.7 0.5 5.9e-79 250.5 0.5 1.0 1 NP_001193113.1
Domain annotation for each sequence (and alignments):
>> NP_001193113.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 250.5 0.5 5.9e-79 5.9e-79 2 167 .] 11 193 .] 10 193 .] 0.99
Alignments for each domain:
== domain 1 score: 250.5 bits; conditional E-value: 5.9e-79
DUF1180 2 srlLalalLLllLLaa.........aaaeasralspaasqpeaepPlppgataaespgkataleaasaraaeggngsspragsaad......... 78
sr+La+alLL+lLL++ +aa+a+++l+paa+ p+++pP ppg++aa+++g+a+aleaa+ar+aeggngs+p+ag+aad
NP_001193113.1 11 SRALASALLLSLLLPElsgpsagrpPAARAAPDLQPAARGPRTRPPPPPGSSAARPAGRAPALEAAGARGAEGGNGSTPGAGPAADdpggkagag 105
689******************************************************************************************** PP
DUF1180 79 ..aggslavvpelsspedkpmtqralivlvvvsaavivylvvRtvrmrrrnrktRrYgvldtnienmEltPLeqdDedddntlFdanhprr 167
agg+lav+p +p+dkpmtqral+vl+vvs+av+vy+vvRtvrmrrrnrktRrYgvldtnienmEltPLeqdDe+ddntlFdanhprr
NP_001193113.1 106 gpAGGVLAVSP---DPGDKPMTQRALTVLMVVSGAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPLEQDDEEDDNTLFDANHPRR 193
***********...****************************************************************************8 PP
Or compare NP_001193113.1 to CDD or PaperBLAST