VIMSS12500 has 249 amino acids
Query: DUF1190 [M=159]
Accession: PF06693.15
Description: Protein of unknown function (DUF1190)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-11 29.1 12.0 3.8e-10 26.5 10.4 2.5 2 VIMSS12500
Domain annotation for each sequence (and alignments):
>> VIMSS12500
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.5 0.0 0.3 0.3 91 107 .. 11 27 .. 6 50 .. 0.59
2 ! 26.5 10.4 3.8e-10 3.8e-10 19 152 .. 98 241 .. 54 246 .. 0.75
Alignments for each domain:
== domain 1 score: -2.5 bits; conditional E-value: 0.3
DUF1190 91 sqPlyrsrsresslkdk 107
s+P+yr++ r++ +
VIMSS12500 11 SRPIYRKQVRQYLAMVA 27
67888887666655544 PP
== domain 2 score: 26.5 bits; conditional E-value: 3.8e-10
DUF1190 19 vsaeeCqaayaeAqkeaaetAPrYasradCeaefGagqCtqaqqssgggsffmPlmaG.fml..grll..sggggyksqPlyrsrsresslkdkyvtas 112
+ e+C+a++++Aq+e++++AP Y sradC+++ C+++++ +s + P++ G ++ g+ +gg++++ l s + + +d+++t +
VIMSS12500 98 IRPEDCEAQMKAAQAEHQRNAPVYGSRADCQTDRV--ICEPTPSGYH-TSGYRPVFGGaYFYpyGNNYtyIYSGGVQQRVLQPSIVYRGTNPDQLITPN 193
5789****************************976..8*99777766.8999999998644411444344334455655555555667788899***** PP
DUF1190 113 gkslgaastakrsvnvaktalkp........kptvtrtvsrgGFGsta 152
g s+ +++t+k s+++a ta +p k t + s GFGst
VIMSS12500 194 GISVPRTTTGKVSTSKAVTAPAPprpsgtaaKGTISGRSSNKGFGSTF 241
*99988888888888888766665444433355555567788999986 PP
Or compare VIMSS12500 to CDD or PaperBLAST