PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS146011 to PF06711 (DUF1198)

VIMSS146011 has 149 amino acids

Query:       DUF1198  [M=143]
Accession:   PF06711.15
Description: Protein of unknown function (DUF1198)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-75  238.0   0.5    1.8e-75  237.9   0.5    1.0  1  VIMSS146011  


Domain annotation for each sequence (and alignments):
>> VIMSS146011  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.9   0.5   1.8e-75   1.8e-75       1     143 []       1     143 [.       1     143 [. 1.00

  Alignments for each domain:
  == domain 1  score: 237.9 bits;  conditional E-value: 1.8e-75
      DUF1198   1 miwlilatlvvvfvvGfrvltsdtrrairrlserlkiepvviesmidqlGktaggeflrylerpneeelqnaaqvlliyqvvivdasdenlelwrrll 98 
                  m+w+i+a+l+vvf+vG+rvltsdtr+ai+++s++lki+p++iesm++++G++++++f+r+++++++ee+++aa++++iy+++i+++sden+elwr++l
  VIMSS146011   1 MTWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTL 98 
                  9************************************************************************************************* PP

      DUF1198  99 qkarlaapladeqirlalgflreldpdlselkafqrrynalfnPe 143
                  ++a+++++la+e++++al++++eld+d++el++f+r+yn +fnPe
  VIMSS146011  99 IRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPE 143
                  ********************************************8 PP



Or compare VIMSS146011 to CDD or PaperBLAST