PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::AAH78732.1 to PF06722 (EryCIII-like_C)

CAZy::AAH78732.1 has 543 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    1.3e-20   60.0   0.0    2.7e-20   58.9   0.0    1.6  1  CAZy::AAH78732.1  


Domain annotation for each sequence (and alignments):
>> CAZy::AAH78732.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   2.7e-20   2.7e-20      27     133 ..     353     461 ..     331     469 .. 0.92

  Alignments for each domain:
  == domain 1  score: 58.9 bits;  conditional E-value: 2.7e-20
    EryCIII-like_C  27 relpdnvRlvdfvPlgvll..ptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlskdeltsdsiakavaevvedpa 117
                       ++l +n  lv ++P ++ll  p + a++ h+G+  +  ++  GvP v++p + d++ +a+r+  +Gag++l++ e+t+d +++a++ v+++++
  CAZy::AAH78732.1 353 SNLAKNTILVKWLPQNDLLghPKARAFITHSGSHGIYEGICNGVPMVMMPLFGDQMDNAKRMETRGAGVTLNVLEMTADDLENALKTVINNKS 445
                       67889999**********9667899******************************************************************** PP

    EryCIII-like_C 118 yraaaaklaeeiaaeP 133
                       y+++  +l +   ++P
  CAZy::AAH78732.1 446 YKENIMRLSSLHKDRP 461
                       ****999876555555 PP



Or compare CAZy::AAH78732.1 to CDD or PaperBLAST