PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::ABC02800.1 to PF06722 (EryCIII-like_C)

CAZy::ABC02800.1 has 445 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    2.7e-22   65.4   1.1    6.8e-22   64.1   0.1    2.1  2  CAZy::ABC02800.1  


Domain annotation for each sequence (and alignments):
>> CAZy::ABC02800.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1     0.082     0.082      48      81 ..      66      98 ..      63     127 .. 0.69
   2 !   64.1   0.1   6.8e-22   6.8e-22      27     145 .]     316     433 ..     307     433 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.082
    EryCIII-like_C 48 caaivHhgGagstltalsfGvPqvvlpdeadaav 81
                      ++a+ Hh+Ga+  l++++ G+  + l    d+++
  CAZy::ABC02800.1 66 AEAFPHHAGAT-GLSGMTLGLKEIFLDPAPDQMA 98
                      67788898875.4567777777777666555555 PP

  == domain 2  score: 64.1 bits;  conditional E-value: 6.8e-22
    EryCIII-like_C  27 relpdnvRlvdfvPlgvllptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlskdeltsdsiakavaevvedpayr 119
                       + lp nvRl  ++P + llp  ++++ +gG g + +als+GvP vv + + ++   + rva  Gag+ l+   l  +++++av +v++d+ay 
  CAZy::ABC02800.1 316 GRLPANVRLEPYIPHHQLLPKVQVMITNGGYGGVNAALSHGVPLVVAAATEEKHEVGARVAWSGAGLHLTG-RLSEERLREAVRRVLQDGAYA 407
                       579**********************************************999999999**********975.6889***************** PP

    EryCIII-like_C 120 aaaaklaeeiaaePsPtEvakkleel 145
                         aa l+ee      P+  a  +eel
  CAZy::ABC02800.1 408 RRAASLREEFRRYDGPELAAAAIEEL 433
                       *********99888888777777775 PP



Or compare CAZy::ABC02800.1 to CDD or PaperBLAST